Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RN7SKP61-201ENST00000410642 295 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 EIF1P1-201ENST00000421436 341 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.59□□□□□ -2.32
FREM3P0C091 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.59□□□□□ -2.32
FREM3P0C091 RPL26P26-201ENST00000480251 434 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 AC105313.1-201ENST00000509121 353 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.59□□□□□ -2.32
FREM3P0C091 MTCYBP33-201ENST00000575007 1130 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 MIR1273C-201ENST00000578669 77 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 AL022154.1-201ENST00000604698 785 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 RNU6-88P-201ENST00000606801 100 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 MIR1248-201ENST00000629190 106 ntBASIC0.59□□□□□ -2.32
FREM3P0C091 RNU6-862P-201ENST00000362804 105 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 Y_RNA.332-201ENST00000365271 113 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 RNU2-62P-201ENST00000410868 191 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AL161935.2-201ENST00000414627 60 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 MTCYBP5-201ENST00000423752 1135 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AC245047.4-201ENST00000433189 144 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.58□□□□□ -2.32
FREM3P0C091 MTCYBP42-201ENST00000444653 1130 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AP000542.1-201ENST00000448473 371 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AC093899.1-201ENST00000457984 376 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC093259.1-201ENST00000509755 300 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 RNU5F-2P-201ENST00000516066 82 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.58□□□□□ -2.32
FREM3P0C091 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 MIR8063-201ENST00000621930 81 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 SNORA4.1-201ENST00000364263 144 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 RNU6-1019P-201ENST00000364424 107 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 MIR608-201ENST00000384820 100 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 UBE2D3P3-201ENST00000426992 425 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AC027119.1-201ENST00000440877 241 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AL353718.1-201ENST00000451028 517 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AC003071.1-201ENST00000451219 789 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.58□□□□□ -2.32
FREM3P0C091 RPL31P3-201ENST00000458430 332 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 SCARNA16.2-201ENST00000516520 172 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 RNU6-64P-201ENST00000517119 105 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 RNU6-1028P-201ENST00000517164 93 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.58□□□□□ -2.32
FREM3P0C091 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.58□□□□□ -2.32
FREM3P0C091 AL021879.1-201ENST00000611756 288 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 AL356094.1-201ENST00000624663 1212 ntBASIC0.58□□□□□ -2.32
FREM3P0C091 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
FREM3P0C091 RNU6-743P-201ENST00000364151 106 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 RNU6-487P-201ENST00000365430 104 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 MTCO1P17-201ENST00000411522 491 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 AC013410.2-201ENST00000422627 201 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 AC013262.1-201ENST00000426710 252 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 TIMM9P1-201ENST00000436122 256 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 RN7SKP88-201ENST00000516847 250 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.57□□□□□ -2.32
FREM3P0C091 AP006587.4-201ENST00000526053 529 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
FREM3P0C091 LRRC6P1-201ENST00000532188 885 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 SNORA77B-201ENST00000578179 125 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 AC090578.1-201ENST00000604955 591 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 7SK.8-201ENST00000612110 250 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 7SK.11-201ENST00000615477 250 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 7SK.13-201ENST00000622040 250 ntBASIC0.57□□□□□ -2.32
FREM3P0C091 Y_RNA.99-201ENST00000363138 105 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 RNU5B-4P-201ENST00000363508 111 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 RNU6-72P-201ENST00000384285 79 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 Y_RNA.534-201ENST00000384599 112 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 RPL23AP32-201ENST00000395315 459 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 Y_RNA.623-201ENST00000411128 95 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.56□□□□□ -2.32
FREM3P0C091 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.56□□□□□ -2.32
FREM3P0C091 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.56□□□□□ -2.32
FREM3P0C091 Y_RNA.681-201ENST00000516445 113 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.56□□□□□ -2.32
FREM3P0C091 AL391001.1-201ENST00000602747 715 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC112220.3-201ENST00000605502 502 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC009229.3-201ENST00000608056 282 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC092656.1-203ENST00000624134 423 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
FREM3P0C091 MIR412-201ENST00000362142 91 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 Y_RNA.33-201ENST00000362591 102 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 MIR19A-201ENST00000384878 82 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 RNA5SP511-201ENST00000410487 115 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AL589872.1-201ENST00000426602 288 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AL669831.1-202ENST00000428504 417 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.56□□□□□ -2.32
FREM3P0C091 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.56□□□□□ -2.32
FREM3P0C091 AL583843.1-201ENST00000456070 346 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AC130509.1-201ENST00000464158 433 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.56□□□□□ -2.32
FREM3P0C091 AC091163.3-201ENST00000518269 1144 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 AL590229.1-201ENST00000603497 542 ntBASIC0.56□□□□□ -2.32
FREM3P0C091 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms