Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC006504.6-201ENST00000590142 199 ntBASIC2.92□□□□□ -1.94
HOXC6P09630 AC008737.2-201ENST00000599446 118 ntBASIC2.92□□□□□ -1.94
HOXC6P09630 RNU6-6P-201ENST00000606623 107 ntBASIC2.92□□□□□ -1.94
HOXC6P09630 AC090740.1-201ENST00000623193 2262 ntBASIC2.92□□□□□ -1.94
HOXC6P09630 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXC6P09630 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AP006437.1-201ENST00000641440 3685 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXC6P09630 Y_RNA.2-201ENST00000362330 96 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 RNU6-593P-201ENST00000364716 112 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 RNU6-1040P-201ENST00000383974 107 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 RNU6-842P-201ENST00000384269 107 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXC6P09630 AL135786.1-201ENST00000415892 214 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC6P09630 AL356867.1-201ENST00000429623 299 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC6P09630 AC092573.2-201ENST00000434546 243 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXC6P09630 AL583843.1-201ENST00000456070 346 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AC018437.1-201ENST00000492214 406 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 SCARNA16.2-201ENST00000516520 172 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AC069113.1-201ENST00000517763 267 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AC011494.1-201ENST00000596454 237 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 CYP2C61P-201ENST00000604072 290 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AP001836.1-201ENST00000604675 523 ntBASIC2.91□□□□□ -1.94
HOXC6P09630 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXC6P09630 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXC6P09630 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC6P09630 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXC6P09630 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HOXC6P09630 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC6P09630 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC6P09630 RNU6-1115P-201ENST00000362490 106 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 Y_RNA.28-201ENST00000362554 111 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 Y_RNA.148-201ENST00000363557 117 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 SNORA51.4-201ENST00000364993 124 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 RNU6-395P-201ENST00000365662 106 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 MIR517A-201ENST00000385001 87 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 RNU2-33P-201ENST00000410344 192 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC6P09630 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC6P09630 UBE2V1P4-201ENST00000425374 344 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AC009237.8-201ENST00000445492 379 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC6P09630 SNORD5.1-201ENST00000458800 75 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC6P09630 AC011005.2-201ENST00000487324 359 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 PTP4A1P4-201ENST00000512479 322 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 RNU6-1046P-201ENST00000516538 107 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 SNORD59.2-201ENST00000516873 68 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 RNU6-711P-201ENST00000517255 106 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AC022634.1-201ENST00000520765 532 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 IGKV3-31-201ENST00000523109 329 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXC6P09630 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXC6P09630 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HOXC6P09630 AC004805.2-201ENST00000605382 482 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AL121917.1-203ENST00000605534 577 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AL355802.3-201ENST00000607571 545 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 AC007485.1-201ENST00000616755 206 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC6P09630 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXC6P09630 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXC6P09630 AC008568.2-201ENST00000623862 2313 ntBASIC2.9□□□□□ -1.95
HOXC6P09630 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC6P09630 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC6P09630 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC6P09630 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HOXC6P09630 Y_RNA.48-201ENST00000362710 103 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC6P09630 Y_RNA.463-201ENST00000384271 102 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC6P09630 AC093151.1-201ENST00000427711 313 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AL645568.3-201ENST00000433683 316 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC6P09630 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.89□□□□□ -1.95
HOXC6P09630 snoU109.2-201ENST00000459316 135 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AC103975.1-201ENST00000482506 483 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 HMGB1P30-201ENST00000492455 606 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXC6P09630 Y_RNA.661-201ENST00000516003 99 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 RN7SKP282-201ENST00000516824 299 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 RNU6-699P-201ENST00000517081 110 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 RN7SKP295-201ENST00000517264 153 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.89□□□□□ -1.95
HOXC6P09630 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.89□□□□□ -1.95
HOXC6P09630 MIR4524B-201ENST00000581569 115 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AL158827.2-201ENST00000602494 330 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AC007938.3-201ENST00000604965 623 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AC011890.2-201ENST00000613393 294 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 RMST_4.1-201ENST00000616886 107 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 AL691447.3-201ENST00000635020 330 ntBASIC2.89□□□□□ -1.95
HOXC6P09630 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HOXC6P09630 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HOXC6P09630 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.88□□□□□ -1.95
HOXC6P09630 AC007785.2-201ENST00000598627 1916 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms