Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL137100.2-201ENST00000555786 315 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 MTCYBP33-201ENST00000575007 1130 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 BNIP3P9-201ENST00000603714 553 ntBASIC0.11□□□□□ -2.39
HMGN1P05114 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGN1P05114 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.11□□□□□ -2.39
HMGN1P05114 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
HMGN1P05114 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
HMGN1P05114 RNU6-862P-201ENST00000362804 105 ntBASIC0.1□□□□□ -2.39
HMGN1P05114 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
HMGN1P05114 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.1□□□□□ -2.39
HMGN1P05114 AL031281.1-201ENST00000604049 488 ntBASIC0.1□□□□□ -2.39
HMGN1P05114 AC092106.3-201ENST00000611308 722 ntBASIC0.1□□□□□ -2.39
HMGN1P05114 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
HMGN1P05114 RNU6-343P-201ENST00000364709 104 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 RNA5SP193-201ENST00000410353 107 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 RNA5SP247-201ENST00000411181 105 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGN1P05114 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.09□□□□□ -2.4
HMGN1P05114 ARL5AP1-201ENST00000418991 388 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 RNU6-1223P-201ENST00000517124 104 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 AL358072.1-201ENST00000604156 575 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 AL360219.1-201ENST00000610230 366 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 AL138955.1-201ENST00000622881 1040 ntBASIC0.09□□□□□ -2.4
HMGN1P05114 AL589743.1-201ENST00000551932 2712 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 SNORD3E-201ENST00000362899 217 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 SNORA25.9-201ENST00000365087 128 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 RNU6-166P-201ENST00000384371 107 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 AL359634.1-202ENST00000404721 284 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 RNA5SP390-201ENST00000410191 113 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 AC016831.2-201ENST00000417179 352 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN1P05114 RPEP5-201ENST00000441137 268 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 TAF9P1-201ENST00000445421 515 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 TAF9P2-201ENST00000454958 515 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
HMGN1P05114 AC104806.1-201ENST00000508720 308 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.08□□□□□ -2.4
HMGN1P05114 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.08□□□□□ -2.4
HMGN1P05114 CR383656.8-201ENST00000549046 145 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 SNRPGP1-201ENST00000553864 222 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 KC877982.1-201ENST00000602313 470 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 Z69720.2-201ENST00000624755 279 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 SNORD3E-202ENST00000627253 216 ntBASIC0.08□□□□□ -2.4
HMGN1P05114 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.07□□□□□ -2.4
HMGN1P05114 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
HMGN1P05114 RNU6-950P-201ENST00000384651 107 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 MIR301A-201ENST00000385261 86 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGN1P05114 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.07□□□□□ -2.4
HMGN1P05114 AC073910.1-201ENST00000445047 438 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 ELOCP30-201ENST00000447108 299 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 RNU7-34P-201ENST00000459394 64 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGN1P05114 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.07□□□□□ -2.4
HMGN1P05114 SNORA68.3-201ENST00000515906 83 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 RNU6-405P-201ENST00000516637 110 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 RNU6-467P-201ENST00000517027 110 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGN1P05114 OR6C7P-201ENST00000547875 934 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.07□□□□□ -2.4
HMGN1P05114 AC068620.3-201ENST00000602749 560 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 AC253576.2-201ENST00000618815 580 ntBASIC0.07□□□□□ -2.4
HMGN1P05114 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
HMGN1P05114 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
HMGN1P05114 MIRLET7D-201ENST00000362263 87 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 RNU1-96P-201ENST00000364163 162 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 RPS3AP37-201ENST00000419176 745 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.06□□□□□ -2.4
HMGN1P05114 AL162395.1-201ENST00000457882 422 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 RPL39P36-201ENST00000490784 156 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 RPF2P2-201ENST00000504693 896 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 SUMO2P16-201ENST00000519475 264 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.06□□□□□ -2.4
HMGN1P05114 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.06□□□□□ -2.4
HMGN1P05114 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.06□□□□□ -2.4
HMGN1P05114 AC060771.1-201ENST00000582031 164 ntBASIC0.06□□□□□ -2.4
HMGN1P05114 MIR340-201ENST00000362125 95 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.05□□□□□ -2.4
HMGN1P05114 USP9YP14-201ENST00000430663 563 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 RPS20P10-201ENST00000451209 253 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AC091435.1-201ENST00000505442 584 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 MTND2P33-201ENST00000506452 1031 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 SNORA76.2-201ENST00000517095 137 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AC025678.1-201ENST00000567861 338 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AL138726.1-201ENST00000614873 333 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.05□□□□□ -2.4
HMGN1P05114 AC120349.2-201ENST00000625002 298 ntBASIC0.05□□□□□ -2.4
HMGN1P05114 AL159152.1-201ENST00000635019 2587 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 Y_RNA.363-201ENST00000365529 113 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 MIR216A-201ENST00000385063 110 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 MTCO3P41-201ENST00000414801 328 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 RNFT1P2-201ENST00000443064 757 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.04□□□□□ -2.4
HMGN1P05114 AL353718.1-201ENST00000451028 517 ntBASIC0.04□□□□□ -2.4
HMGN1P05114 AC003071.1-201ENST00000451219 789 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms