Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 snoU109.2-201ENST00000459316 135 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 HMGN2P13-201ENST00000476476 274 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RPS27AP10-201ENST00000496103 208 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 RNU6-377P-201ENST00000515965 102 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 AC020661.2-201ENST00000560114 134 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 AC004852.3-201ENST00000614131 326 ntBASIC3.96□□□□□ -1.78
RAPGEF3O95398 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.96□□□□□ -1.78
RAPGEF3O95398 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.96□□□□□ -1.78
RAPGEF3O95398 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RAPGEF3O95398 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 MIR369-201ENST00000362155 70 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 Y_RNA.4-201ENST00000362333 112 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 SNORD114-1-201ENST00000362705 72 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 MIR27B-201ENST00000385129 97 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 MIR559-201ENST00000385188 96 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 SNORA75.6-201ENST00000391318 127 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 USMG5P1-201ENST00000425964 177 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AL133396.1-201ENST00000432048 687 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 AC008571.1-201ENST00000467232 300 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 CKS1BP2-201ENST00000497342 240 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 SNORA31.1-201ENST00000515993 133 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 SNORA31.5-201ENST00000516190 133 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AP003072.1-201ENST00000531740 145 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AL391261.3-201ENST00000557194 520 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AC009314.1-201ENST00000603871 304 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 AC110774.1-201ENST00000623567 2018 ntBASIC3.95□□□□□ -1.78
RAPGEF3O95398 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RAPGEF3O95398 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAPGEF3O95398 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RAPGEF3O95398 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RAPGEF3O95398 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 RPL9P7-201ENST00000330965 580 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNU6-78P-201ENST00000362897 107 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNU6-1040P-201ENST00000383974 107 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNU6-790P-201ENST00000384479 105 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 DPH3P2-201ENST00000422618 250 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 AC006539.3-201ENST00000454258 129 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 HMGN2P23-201ENST00000456759 269 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 RPL9P9-202ENST00000466501 579 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RN7SL636P-201ENST00000497504 294 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 AC114801.2-201ENST00000503825 781 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 AK3P2-201ENST00000507976 429 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 ACA59.1-201ENST00000515966 143 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNU6-976P-201ENST00000516086 111 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNA5SP458-201ENST00000516188 119 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RNU6-1213P-201ENST00000517075 94 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 VN1R107P-201ENST00000601784 209 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 SNRPGP17-201ENST00000603780 214 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 U4.3-201ENST00000621047 82 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAPGEF3O95398 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
RAPGEF3O95398 AC110491.1-201ENST00000562191 2010 ntBASIC3.94□□□□□ -1.78
RAPGEF3O95398 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAPGEF3O95398 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAPGEF3O95398 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RAPGEF3O95398 RNU6-898P-201ENST00000365627 104 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 Y_RNA.404-201ENST00000383978 102 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 RNU6-474P-201ENST00000384243 107 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 AL513475.1-201ENST00000406602 315 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 RN7SKP58-201ENST00000411010 305 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 BPY2DP-201ENST00000422208 265 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC124916.1-201ENST00000444020 547 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 RPL7P42-201ENST00000481005 679 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.93□□□□□ -1.78
RAPGEF3O95398 SCARNA15.1-201ENST00000516384 125 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 SNORD59.2-201ENST00000516873 68 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC010186.2-204ENST00000537668 439 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 MIR3171-201ENST00000584270 74 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC022432.1-201ENST00000595739 310 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 AC092628.2-201ENST00000622492 339 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RAPGEF3O95398 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 CDC27P3-201ENST00000635418 1910 ntBASIC3.93□□□□□ -1.78
RAPGEF3O95398 Y_RNA.2-201ENST00000362330 96 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 Y_RNA.112-201ENST00000363250 102 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 SNORD56.3-201ENST00000363507 71 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 Y_RNA.164-201ENST00000363709 102 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 RNU6-890P-201ENST00000384121 107 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 Y_RNA.445-201ENST00000384168 102 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 RNU1-101P-201ENST00000391171 127 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 EI24P2-201ENST00000397776 1076 ntBASIC3.92□□□□□ -1.78
RAPGEF3O95398 RPS29P13-201ENST00000402041 169 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms