Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SNORD33-201ENST00000362761 85 ntBASIC1.19□□□□□ -2.22
VAPBO95292 RNU6-26P-201ENST00000383985 107 ntBASIC1.19□□□□□ -2.22
VAPBO95292 MIR122-201ENST00000385044 85 ntBASIC1.19□□□□□ -2.22
VAPBO95292 RNU2-7P-201ENST00000410794 178 ntBASIC1.19□□□□□ -2.22
VAPBO95292 ELOCP4-201ENST00000420090 333 ntBASIC1.19□□□□□ -2.22
VAPBO95292 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPBO95292 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPBO95292 UBE2V1P8-201ENST00000437166 265 ntBASIC1.19□□□□□ -2.22
VAPBO95292 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
VAPBO95292 JTBP1-201ENST00000441314 247 ntBASIC1.19□□□□□ -2.22
VAPBO95292 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.19□□□□□ -2.22
VAPBO95292 AC079448.1-201ENST00000449377 373 ntBASIC1.19□□□□□ -2.22
VAPBO95292 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.19□□□□□ -2.22
VAPBO95292 RNA5SP269-201ENST00000459032 137 ntBASIC1.19□□□□□ -2.22
VAPBO95292 AC145146.1-201ENST00000496370 254 ntBASIC1.19□□□□□ -2.22
VAPBO95292 MTND3P5-201ENST00000512798 333 ntBASIC1.19□□□□□ -2.22
VAPBO95292 MTND2P7-201ENST00000521337 640 ntBASIC1.19□□□□□ -2.22
VAPBO95292 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
VAPBO95292 AC023043.2-201ENST00000589678 1026 ntBASIC1.19□□□□□ -2.22
VAPBO95292 AL355802.3-201ENST00000607571 545 ntBASIC1.19□□□□□ -2.22
VAPBO95292 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
VAPBO95292 SNORD32B-201ENST00000364460 84 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RNU6-660P-201ENST00000364566 109 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RNU6-438P-201ENST00000365561 103 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RNU6-39P-201ENST00000384344 107 ntBASIC1.18□□□□□ -2.22
VAPBO95292 SNORA24.1-201ENST00000384401 135 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RNU6-83P-201ENST00000384568 112 ntBASIC1.18□□□□□ -2.22
VAPBO95292 SNORD115.1-201ENST00000391109 76 ntBASIC1.18□□□□□ -2.22
VAPBO95292 MTCO3P41-201ENST00000414801 328 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.18□□□□□ -2.22
VAPBO95292 BTF3P4-201ENST00000418852 495 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AC123900.1-201ENST00000420390 96 ntBASIC1.18□□□□□ -2.22
VAPBO95292 MED13P1-201ENST00000428342 171 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AL669831.1-202ENST00000428504 417 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.18□□□□□ -2.22
VAPBO95292 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.18□□□□□ -2.22
VAPBO95292 RPL9P9-202ENST00000466501 579 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RPL31P58-201ENST00000469001 379 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AC022447.4-201ENST00000504053 364 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RPL21P5-201ENST00000554662 472 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AC090888.2-201ENST00000559765 1144 ntBASIC1.18□□□□□ -2.22
VAPBO95292 MIR4524B-201ENST00000581569 115 ntBASIC1.18□□□□□ -2.22
VAPBO95292 VN1R80P-201ENST00000597126 338 ntBASIC1.18□□□□□ -2.22
VAPBO95292 RNU6-87P-201ENST00000607561 108 ntBASIC1.18□□□□□ -2.22
VAPBO95292 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VAPBO95292 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.18□□□□□ -2.22
VAPBO95292 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VAPBO95292 AC097372.5-201ENST00000623665 376 ntBASIC1.18□□□□□ -2.22
VAPBO95292 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
VAPBO95292 RNU4-56P-201ENST00000364700 142 ntBASIC1.17□□□□□ -2.22
VAPBO95292 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
VAPBO95292 MIR558-201ENST00000384920 94 ntBASIC1.17□□□□□ -2.22
VAPBO95292 SNORA12-201ENST00000391162 147 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.17□□□□□ -2.22
VAPBO95292 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.17□□□□□ -2.22
VAPBO95292 RPS27AP8-201ENST00000452665 445 ntBASIC1.17□□□□□ -2.22
VAPBO95292 ART2BP-201ENST00000453501 499 ntBASIC1.17□□□□□ -2.22
VAPBO95292 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.17□□□□□ -2.22
VAPBO95292 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VAPBO95292 AC091951.3-201ENST00000504093 246 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AC112206.4-201ENST00000515142 405 ntBASIC1.17□□□□□ -2.22
VAPBO95292 SNORD60.2-201ENST00000516883 86 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.17□□□□□ -2.22
VAPBO95292 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
VAPBO95292 SNORA77B-201ENST00000578179 125 ntBASIC1.17□□□□□ -2.22
VAPBO95292 MIR3937-201ENST00000580135 106 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 MIR3136-201ENST00000583498 78 ntBASIC1.17□□□□□ -2.22
VAPBO95292 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.17□□□□□ -2.22
VAPBO95292 SNORD98-201ENST00000636377 67 ntBASIC1.17□□□□□ -2.22
VAPBO95292 AL445984.1-201ENST00000637834 659 ntBASIC1.17□□□□□ -2.22
VAPBO95292 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.16□□□□□ -2.22
VAPBO95292 Y_RNA.140-201ENST00000363474 103 ntBASIC1.16□□□□□ -2.22
VAPBO95292 RNU4-91P-201ENST00000364778 135 ntBASIC1.16□□□□□ -2.22
VAPBO95292 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
VAPBO95292 MIR520A-201ENST00000384862 85 ntBASIC1.16□□□□□ -2.22
VAPBO95292 EEF1A1P40-201ENST00000412883 573 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AL022238.1-201ENST00000442557 355 ntBASIC1.16□□□□□ -2.22
VAPBO95292 SNRPGP7-201ENST00000469016 106 ntBASIC1.16□□□□□ -2.22
VAPBO95292 RPL26P26-201ENST00000480251 434 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AC093852.1-201ENST00000503587 266 ntBASIC1.16□□□□□ -2.22
VAPBO95292 RBBP4P6-201ENST00000508098 202 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AF131216.2-201ENST00000512316 564 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.16□□□□□ -2.22
VAPBO95292 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.16□□□□□ -2.22
VAPBO95292 AC069114.2-201ENST00000604699 304 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AC090578.1-201ENST00000604955 591 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AC131159.1-201ENST00000621854 213 ntBASIC1.16□□□□□ -2.22
VAPBO95292 AC019226.2-201ENST00000625973 424 ntBASIC1.16□□□□□ -2.22
VAPBO95292 MTND5P9-201ENST00000503854 1755 ntBASIC1.16□□□□□ -2.22
VAPBO95292 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
VAPBO95292 MIR378A-201ENST00000362177 66 ntBASIC1.15□□□□□ -2.23
VAPBO95292 RNU4-15P-201ENST00000362613 141 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms