Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-1156P-201ENST00000410365 100 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RN7SKP284-201ENST00000411002 343 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AC113618.1-201ENST00000416747 285 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RPL23AP95-201ENST00000426806 265 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AL365496.1-201ENST00000426885 215 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AL160004.2-201ENST00000432935 350 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AL353997.1-201ENST00000432936 108 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS4BO75351 AL031659.1-201ENST00000447075 539 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS4BO75351 MTND5P22-201ENST00000458380 195 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 MED28P2-201ENST00000475771 317 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AP001025.1-201ENST00000486139 332 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 RNU6-581P-201ENST00000516214 105 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 SNORD19.2-201ENST00000516978 73 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 Y_RNA.720-201ENST00000517166 92 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 SCARNA20.6-201ENST00000517251 106 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AC008737.2-201ENST00000599446 118 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 AC092447.9-201ENST00000603395 144 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 HMGB1P24-202ENST00000615653 685 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 MIR3199-2-201ENST00000636243 86 ntBASIC3.19□□□□□ -1.9
VPS4BO75351 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VPS4BO75351 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS4BO75351 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VPS4BO75351 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS4BO75351 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VPS4BO75351 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 RNU2-23P-201ENST00000410545 195 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS4BO75351 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS4BO75351 AL358176.2-201ENST00000425769 204 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS4BO75351 AC092185.1-201ENST00000491371 97 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 ACA59.2-201ENST00000517061 156 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS4BO75351 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS4BO75351 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 SNORD58B-201ENST00000607313 66 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AC091903.1-201ENST00000624322 454 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AC138305.3-201ENST00000624988 240 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VPS4BO75351 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 AC008669.1-201ENST00000565823 2178 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
VPS4BO75351 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS4BO75351 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS4BO75351 Y_RNA.133-201ENST00000363428 110 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS4BO75351 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 RPS15AP5-201ENST00000436276 388 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AL161651.1-201ENST00000440882 223 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC112492.4-201ENST00000456549 352 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 RN7SL429P-201ENST00000479090 223 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 RN7SL489P-201ENST00000486185 223 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 RN7SL327P-201ENST00000488659 223 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 AC105758.1-201ENST00000506038 399 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 RNU6-711P-201ENST00000517255 106 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 IGKV2-26-201ENST00000518305 343 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS4BO75351 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS4BO75351 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS4BO75351 AC104695.3-201ENST00000604052 296 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC091152.3-201ENST00000604227 325 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 RN7SL853P-201ENST00000617250 223 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC024581.2-201ENST00000619986 252 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC097372.5-201ENST00000623665 376 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS4BO75351 MIR3529-201ENST00000637713 78 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 AC005592.1-201ENST00000566527 1640 ntBASIC3.17□□□□□ -1.9
VPS4BO75351 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VPS4BO75351 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS4BO75351 Z83843.1-201ENST00000604070 3685 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
VPS4BO75351 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
VPS4BO75351 RNU6-622P-201ENST00000384272 103 ntBASIC3.16□□□□□ -1.9
VPS4BO75351 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms