Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC131055.1-201ENST00000584626 316 ntBASIC4.99□□□□□ -1.61
RNF40O75150 AL021997.2-201ENST00000615674 271 ntBASIC4.99□□□□□ -1.61
RNF40O75150 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF40O75150 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF40O75150 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF40O75150 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
RNF40O75150 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RNF40O75150 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF40O75150 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF40O75150 RNU1-75P-201ENST00000347264 129 ntBASIC4.98□□□□□ -1.61
RNF40O75150 Y_RNA.346-201ENST00000365385 112 ntBASIC4.98□□□□□ -1.61
RNF40O75150 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF40O75150 AP002088.1-201ENST00000382740 395 ntBASIC4.98□□□□□ -1.61
RNF40O75150 RNU6-484P-201ENST00000384016 107 ntBASIC4.98□□□□□ -1.61
RNF40O75150 MIR921-201ENST00000401133 56 ntBASIC4.98□□□□□ -1.61
RNF40O75150 Z74021.1-201ENST00000423610 407 ntBASIC4.98□□□□□ -1.61
RNF40O75150 AL691449.1-201ENST00000426570 421 ntBASIC4.98□□□□□ -1.61
RNF40O75150 AC000111.2-201ENST00000448200 210 ntBASIC4.98□□□□□ -1.61
RNF40O75150 AC010469.1-201ENST00000463864 576 ntBASIC4.98□□□□□ -1.61
RNF40O75150 RNA5SP154-201ENST00000516193 111 ntBASIC4.98□□□□□ -1.61
RNF40O75150 SNORA31.8-201ENST00000516327 108 ntBASIC4.98□□□□□ -1.61
RNF40O75150 RNU7-115P-201ENST00000516433 55 ntBASIC4.98□□□□□ -1.61
RNF40O75150 PARP1P2-201ENST00000556806 195 ntBASIC4.98□□□□□ -1.61
RNF40O75150 AP001318.4-201ENST00000616637 121 ntBASIC4.98□□□□□ -1.61
RNF40O75150 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.98□□□□□ -1.61
RNF40O75150 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RNF40O75150 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RNF40O75150 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.98□□□□□ -1.61
RNF40O75150 TLK1P1-201ENST00000456760 2440 ntBASIC4.97□□□□□ -1.61
RNF40O75150 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF40O75150 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
RNF40O75150 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF40O75150 RNU6-766P-201ENST00000362478 107 ntBASIC4.97□□□□□ -1.61
RNF40O75150 RNU6-508P-201ENST00000363231 103 ntBASIC4.97□□□□□ -1.61
RNF40O75150 CBX3P9-201ENST00000402326 552 ntBASIC4.97□□□□□ -1.61
RNF40O75150 RNA5SP201-201ENST00000410316 124 ntBASIC4.97□□□□□ -1.61
RNF40O75150 CYCSP48-201ENST00000417124 323 ntBASIC4.97□□□□□ -1.61
RNF40O75150 PTMAP3-201ENST00000447474 330 ntBASIC4.97□□□□□ -1.61
RNF40O75150 AL160236.1-201ENST00000556317 195 ntBASIC4.97□□□□□ -1.61
RNF40O75150 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF40O75150 MIR4277-201ENST00000578298 84 ntBASIC4.97□□□□□ -1.61
RNF40O75150 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 MIR3136-201ENST00000583498 78 ntBASIC4.97□□□□□ -1.61
RNF40O75150 MIR4715-201ENST00000584117 79 ntBASIC4.97□□□□□ -1.61
RNF40O75150 FAM27B-201ENST00000610601 213 ntBASIC4.97□□□□□ -1.61
RNF40O75150 LINC00901.1-201ENST00000617252 152 ntBASIC4.97□□□□□ -1.61
RNF40O75150 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.97□□□□□ -1.61
RNF40O75150 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF40O75150 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RNF40O75150 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RNF40O75150 AL592182.3-201ENST00000642132 3304 ntBASIC4.97□□□□□ -1.61
RNF40O75150 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
RNF40O75150 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
RNF40O75150 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RNF40O75150 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF40O75150 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF40O75150 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF40O75150 RNU6-1131P-201ENST00000364955 107 ntBASIC4.96□□□□□ -1.62
RNF40O75150 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.96□□□□□ -1.62
RNF40O75150 Y_RNA.328-201ENST00000365208 113 ntBASIC4.96□□□□□ -1.62
RNF40O75150 U3.30-201ENST00000391308 210 ntBASIC4.96□□□□□ -1.62
RNF40O75150 PTMAP5-201ENST00000393073 333 ntBASIC4.96□□□□□ -1.62
RNF40O75150 RN7SKP101-201ENST00000411376 320 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AC114755.2-201ENST00000413520 361 ntBASIC4.96□□□□□ -1.62
RNF40O75150 RPL39P40-201ENST00000445481 146 ntBASIC4.96□□□□□ -1.62
RNF40O75150 RPS26P28-201ENST00000470806 348 ntBASIC4.96□□□□□ -1.62
RNF40O75150 IGLV3-26-201ENST00000520756 302 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AC100770.1-201ENST00000532310 322 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AL451007.1-201ENST00000595491 289 ntBASIC4.96□□□□□ -1.62
RNF40O75150 SNRPGP15-201ENST00000600149 222 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AL162713.1-201ENST00000604480 262 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AL021707.8-201ENST00000609428 183 ntBASIC4.96□□□□□ -1.62
RNF40O75150 AC025166.1-201ENST00000612411 163 ntBASIC4.96□□□□□ -1.62
RNF40O75150 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF40O75150 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
RNF40O75150 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF40O75150 AC069528.2-201ENST00000624849 1991 ntBASIC4.96□□□□□ -1.62
RNF40O75150 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF40O75150 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RNF40O75150 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF40O75150 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.95□□□□□ -1.62
RNF40O75150 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF40O75150 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF40O75150 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF40O75150 MIR448-201ENST00000362131 111 ntBASIC4.95□□□□□ -1.62
RNF40O75150 RNU6-136P-201ENST00000384663 107 ntBASIC4.95□□□□□ -1.62
RNF40O75150 SNORA79-201ENST00000408376 140 ntBASIC4.95□□□□□ -1.62
RNF40O75150 SNORA36B-201ENST00000410438 131 ntBASIC4.95□□□□□ -1.62
RNF40O75150 RPL23AP1-201ENST00000428990 471 ntBASIC4.95□□□□□ -1.62
RNF40O75150 AC016831.4-201ENST00000438302 307 ntBASIC4.95□□□□□ -1.62
RNF40O75150 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF40O75150 RPS27AP10-201ENST00000496103 208 ntBASIC4.95□□□□□ -1.62
RNF40O75150 SCARNA22-201ENST00000503991 125 ntBASIC4.95□□□□□ -1.62
RNF40O75150 Y_RNA.690-201ENST00000516603 95 ntBASIC4.95□□□□□ -1.62
RNF40O75150 TOMM20P2-201ENST00000540082 421 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms