Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHOXO15266 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHOXO15266 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SHOXO15266 MAPK10-373ENST00000641983 6772 ntBASIC3.6□□□□□ -1.83
SHOXO15266 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SHOXO15266 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.6□□□□□ -1.83
SHOXO15266 RNU1-62P-201ENST00000362599 164 ntBASIC3.6□□□□□ -1.83
SHOXO15266 RNA5SP307-201ENST00000362863 116 ntBASIC3.6□□□□□ -1.83
SHOXO15266 Y_RNA.136-201ENST00000363444 102 ntBASIC3.6□□□□□ -1.83
SHOXO15266 Y_RNA.150-201ENST00000363562 102 ntBASIC3.6□□□□□ -1.83
SHOXO15266 SNORA18.3-201ENST00000384122 132 ntBASIC3.6□□□□□ -1.83
SHOXO15266 Y_RNA.498-201ENST00000384460 102 ntBASIC3.6□□□□□ -1.83
SHOXO15266 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.6□□□□□ -1.83
SHOXO15266 RNU6-750P-201ENST00000390946 107 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AL512633.1-201ENST00000399931 655 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AP000567.1-201ENST00000406413 156 ntBASIC3.6□□□□□ -1.83
SHOXO15266 RPS16P5-201ENST00000406501 404 ntBASIC3.6□□□□□ -1.83
SHOXO15266 RNU2-61P-201ENST00000411069 191 ntBASIC3.6□□□□□ -1.83
SHOXO15266 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.6□□□□□ -1.83
SHOXO15266 snoU13.14-201ENST00000459372 104 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AC026784.1-201ENST00000507986 352 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.6□□□□□ -1.83
SHOXO15266 RNU5F-2P-201ENST00000516066 82 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AC024405.2-202ENST00000532731 184 ntBASIC3.6□□□□□ -1.83
SHOXO15266 AP002392.1-201ENST00000537692 208 ntBASIC3.6□□□□□ -1.83
SHOXO15266 MIR8058-201ENST00000615737 89 ntBASIC3.6□□□□□ -1.83
SHOXO15266 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHOXO15266 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHOXO15266 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHOXO15266 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SHOXO15266 UBE2WP1-201ENST00000362030 340 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RNU6-740P-201ENST00000364734 105 ntBASIC3.59□□□□□ -1.83
SHOXO15266 SNORA62-201ENST00000365493 153 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RNU6-886P-201ENST00000384319 105 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RNA5SP397-201ENST00000391323 118 ntBASIC3.59□□□□□ -1.83
SHOXO15266 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.59□□□□□ -1.83
SHOXO15266 RNU7-120P-201ENST00000459334 63 ntBASIC3.59□□□□□ -1.83
SHOXO15266 SNORA31.21-201ENST00000517180 77 ntBASIC3.59□□□□□ -1.83
SHOXO15266 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.59□□□□□ -1.83
SHOXO15266 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.59□□□□□ -1.83
SHOXO15266 AP001781.1-201ENST00000530977 207 ntBASIC3.59□□□□□ -1.83
SHOXO15266 CBX3P4-201ENST00000538909 354 ntBASIC3.59□□□□□ -1.83
SHOXO15266 AC018448.1-201ENST00000552843 316 ntBASIC3.59□□□□□ -1.83
SHOXO15266 AC025281.1-201ENST00000567026 265 ntBASIC3.59□□□□□ -1.83
SHOXO15266 AL512605.2-201ENST00000592972 256 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.59□□□□□ -1.83
SHOXO15266 AL160290.3-201ENST00000604869 165 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RMST_8.1-201ENST00000610287 165 ntBASIC3.59□□□□□ -1.83
SHOXO15266 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
SHOXO15266 MIR6810-201ENST00000622701 70 ntBASIC3.59□□□□□ -1.83
SHOXO15266 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.59□□□□□ -1.83
SHOXO15266 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHOXO15266 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHOXO15266 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHOXO15266 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SHOXO15266 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHOXO15266 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHOXO15266 Y_RNA.76-201ENST00000362931 109 ntBASIC3.58□□□□□ -1.84
SHOXO15266 Y_RNA.383-201ENST00000383855 97 ntBASIC3.58□□□□□ -1.84
SHOXO15266 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
SHOXO15266 RNA5SP87-201ENST00000384155 118 ntBASIC3.58□□□□□ -1.84
SHOXO15266 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
SHOXO15266 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.58□□□□□ -1.84
SHOXO15266 CBX3P9-201ENST00000402326 552 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AL133475.1-201ENST00000404414 305 ntBASIC3.58□□□□□ -1.84
SHOXO15266 RNU6-1140P-201ENST00000410517 106 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOXO15266 IFNA11P-201ENST00000446352 526 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AC091959.1-201ENST00000495857 238 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOXO15266 AC022441.3-201ENST00000605737 136 ntBASIC3.58□□□□□ -1.84
SHOXO15266 FAM25E-202ENST00000608562 189 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AL357075.2-201ENST00000614906 189 ntBASIC3.58□□□□□ -1.84
SHOXO15266 AP005019.3-201ENST00000620418 560 ntBASIC3.58□□□□□ -1.84
SHOXO15266 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.58□□□□□ -1.84
SHOXO15266 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SHOXO15266 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SHOXO15266 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHOXO15266 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
SHOXO15266 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.82-201ENST00000363000 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.92-201ENST00000363043 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.57□□□□□ -1.84
SHOXO15266 RNU6-799P-201ENST00000363567 107 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.235-201ENST00000364412 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.292-201ENST00000364904 97 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.306-201ENST00000365015 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.312-201ENST00000365089 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.322-201ENST00000365151 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHOXO15266 MIR192-201ENST00000384915 110 ntBASIC3.57□□□□□ -1.84
SHOXO15266 SNORA74C-2-201ENST00000411179 201 ntBASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.626-201ENST00000411288 95 ntBASIC3.57□□□□□ -1.84
SHOXO15266 RAB28P5-201ENST00000427490 651 ntBASIC3.57□□□□□ -1.84
SHOXO15266 DNAJC19P7-201ENST00000428811 344 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC091390.1-201ENST00000433904 331 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.57□□□□□ -1.84
SHOXO15266 Y_RNA.650-201ENST00000459002 102 ntBASIC3.57□□□□□ -1.84
SHOXO15266 AC091179.3-201ENST00000474761 144 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 290.2 ms