Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.3□□□□□ -2.04
CCDC188H7C350 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC188H7C350 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 AC241585.2-209ENST00000638217 143 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
CCDC188H7C350 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CCDC188H7C350 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC188H7C350 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC188H7C350 MTND4P1-201ENST00000457501 1466 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU4-56P-201ENST00000364700 142 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU6-692P-201ENST00000384496 107 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AL590002.1-201ENST00000406554 418 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU2-32P-201ENST00000411193 191 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 MTND1P23-201ENST00000416931 372 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AL117339.3-201ENST00000418733 162 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 DNAJC19P4-201ENST00000440115 345 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC243964.1-201ENST00000441814 261 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC087884.1-201ENST00000469738 328 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RPL30P1-201ENST00000488676 339 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC188H7C350 SNORA14.1-201ENST00000516113 141 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNA5SP148-201ENST00000516527 94 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC188H7C350 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC188H7C350 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC188H7C350 AL162413.1-201ENST00000603198 110 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AL161423.1-201ENST00000613700 262 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 YWHAEP7-203ENST00000622054 312 ntBASIC2.29□□□□□ -2.04
CCDC188H7C350 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC188H7C350 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC188H7C350 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC188H7C350 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC188H7C350 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC188H7C350 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC188H7C350 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CCDC188H7C350 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 RNU6-546P-201ENST00000383991 107 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 SNORD73A-201ENST00000386062 65 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 RNU6-780P-201ENST00000391030 104 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC188H7C350 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.28□□□□□ -2.04
CCDC188H7C350 ARL5AP1-201ENST00000418991 388 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC188H7C350 IFNA11P-201ENST00000446352 526 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC188H7C350 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC188H7C350 Y_RNA.654-201ENST00000497848 106 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC188H7C350 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC025423.5-201ENST00000550230 219 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 HSPE1P4-201ENST00000550617 308 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 OR11H5P-201ENST00000554039 926 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC007375.1-201ENST00000554513 578 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC188H7C350 HMGB1P33-201ENST00000563485 527 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC026271.5-201ENST00000577873 130 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC188H7C350 ELOCP5-201ENST00000604924 333 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC245884.12-201ENST00000615364 59 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 AC063943.3-201ENST00000615562 356 ntBASIC2.28□□□□□ -2.04
CCDC188H7C350 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CCDC188H7C350 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC188H7C350 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC188H7C350 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC188H7C350 RNU4-82P-201ENST00000362443 140 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 RNU6-82P-201ENST00000363970 107 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 Y_RNA.378-201ENST00000365652 113 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 MIR95-201ENST00000385072 81 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC188H7C350 AL021397.1-201ENST00000451806 248 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 MTND3P16-201ENST00000452205 344 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC188H7C350 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AL353752.1-201ENST00000454946 260 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC188H7C350 RNU6-965P-201ENST00000516721 96 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 RNU6-667P-201ENST00000517186 102 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 RN7SKP256-201ENST00000517201 314 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC087854.1-201ENST00000519706 414 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 CYCSP26-201ENST00000534107 320 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC188H7C350 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC188H7C350 MIR4424-201ENST00000585257 86 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AL031274.2-201ENST00000599419 203 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC025165.5-201ENST00000602802 578 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AC092807.2-201ENST00000609367 243 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 AL121757.2-201ENST00000611223 313 ntBASIC2.27□□□□□ -2.05
CCDC188H7C350 SNORD98-201ENST00000636377 67 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms