Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL121601.2-201ENST00000438019 707 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC007969.2-201ENST00000441891 191 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AL031274.1-201ENST00000450334 232 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AL122001.1-201ENST00000457027 370 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2□□□□□ -2.09
NPIPA2E9PIF3 SRRM1P2-201ENST00000464531 1192 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AL121594.1-201ENST00000475906 575 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 MTND2P33-201ENST00000506452 1031 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2□□□□□ -2.09
NPIPA2E9PIF3 RNU6-1038P-201ENST00000516516 104 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2□□□□□ -2.09
NPIPA2E9PIF3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2□□□□□ -2.09
NPIPA2E9PIF3 NDUFAF4P1-201ENST00000559425 519 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 APOOP1-201ENST00000604695 592 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC017083.3-201ENST00000609955 700 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC104073.3-201ENST00000610942 955 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 U2.17-201ENST00000611454 95 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC007792.1-201ENST00000623023 402 ntBASIC2□□□□□ -2.09
NPIPA2E9PIF3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
NPIPA2E9PIF3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC005336.3-201ENST00000623833 2679 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 RNA5SP432-201ENST00000362480 116 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 RNU1-23P-201ENST00000363361 144 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 Y_RNA.436-201ENST00000384097 102 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 SNORA67.3-201ENST00000384366 140 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 RNU2-16P-201ENST00000410712 136 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 RNU6-293P-201ENST00000411259 106 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 SNRPGP7-201ENST00000469016 106 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC055731.1-201ENST00000474387 401 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC107401.1-201ENST00000503426 685 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 CCDC34P1-201ENST00000507441 517 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 SNORA4.4-201ENST00000515921 135 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC034114.1-201ENST00000520293 285 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC022880.1-201ENST00000534017 973 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC078814.3-201ENST00000553036 491 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 MIR4529-201ENST00000578110 78 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AL136363.2-201ENST00000604173 851 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC107304.1-201ENST00000604229 296 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 Z82243.1-201ENST00000609432 473 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 AC124864.2-201ENST00000624736 186 ntBASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NPIPA2E9PIF3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 RNU6-105P-201ENST00000363909 104 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 SNORA51.11-201ENST00000384442 131 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 RNA5SP219-201ENST00000390940 113 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 MTCO3P40-201ENST00000392516 676 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 CALM2P3-201ENST00000400429 449 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 RNU7-167P-201ENST00000459160 62 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 snoU13.14-201ENST00000459372 104 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC087884.1-201ENST00000469738 328 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC018868.1-201ENST00000491307 315 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 RNA5SP401-201ENST00000515920 127 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 SNORA40.12-201ENST00000516329 111 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC104383.1-201ENST00000530297 370 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 MTCO3P23-201ENST00000561363 289 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC103987.3-201ENST00000582071 292 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AP001330.5-201ENST00000607176 411 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 HULC.1-201ENST00000612720 240 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC022202.1-201ENST00000613515 211 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.98□□□□□ -2.09
NPIPA2E9PIF3 SNORD114-1-201ENST00000362705 72 ntBASIC1.97□□□□□ -2.09
NPIPA2E9PIF3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.97□□□□□ -2.09
NPIPA2E9PIF3 RNU6-336P-201ENST00000364891 107 ntBASIC1.97□□□□□ -2.09
NPIPA2E9PIF3 SNORA69-201ENST00000383895 132 ntBASIC1.97□□□□□ -2.09
NPIPA2E9PIF3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms