Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 LARP7P4-201ENST00000481075 878 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC010587.2-201ENST00000511727 448 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC107027.2-201ENST00000512197 115 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC026782.1-201ENST00000512952 449 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC010376.1-201ENST00000522101 334 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC023442.1-201ENST00000531247 422 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL356157.2-201ENST00000605122 111 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AC096586.2-201ENST00000610260 441 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL391099.1-201ENST00000624635 187 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 AL109659.3-201ENST00000624985 950 ntBASIC-0.23□□□□□ -2.45
COL6A5A8TX70 MIR140-201ENST00000385282 100 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC111000.5-201ENST00000506559 1178 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 SNORA40.12-201ENST00000516329 111 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 SNORA31.17-201ENST00000516953 127 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 RPL23AP91-201ENST00000569211 455 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 SUMO2P14-201ENST00000604488 293 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AL359854.1-201ENST00000614203 1594 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 SNORD14C-201ENST00000365382 88 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 MIR29B2-201ENST00000385055 81 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 GTF2IP3-201ENST00000433887 494 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL6A5A8TX70 COPS8P3-201ENST00000526024 482 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC002400.1-201ENST00000569310 726 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC012065.4-201ENST00000602445 679 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AC008498.1-201ENST00000613012 531 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 MIR6129-201ENST00000616087 109 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 AL359314.1-201ENST00000616913 261 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 MIR5739-201ENST00000619803 80 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
COL6A5A8TX70 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 MIR95-201ENST00000385072 81 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 SNORD12-201ENST00000391002 90 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNU2-3P-201ENST00000410144 191 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 HMGN2P26-201ENST00000463169 339 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC114755.3-201ENST00000481111 251 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 MIR4432-201ENST00000581823 84 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 BBIP1P1-201ENST00000602999 279 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC090578.1-201ENST00000604955 591 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AP002826.1-201ENST00000608835 315 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC055764.2-201ENST00000610089 670 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AL589743.7-201ENST00000612637 233 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNU6-24P-201ENST00000384440 107 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 MIR124-2-201ENST00000385081 109 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNA5SP300-201ENST00000391197 107 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AL355796.1-201ENST00000406706 323 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC138623.1-201ENST00000418060 216 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC063976.4-201ENST00000421971 163 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 FABP5P4-201ENST00000437203 171 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 RNU6-581P-201ENST00000516214 105 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
COL6A5A8TX70 MIR3529-201ENST00000637713 78 ntBASIC-0.25□□□□□ -2.45
COL6A5A8TX70 SNORD115-3-201ENST00000363100 82 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 RNU6-270P-201ENST00000364131 105 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 RNY1P7-201ENST00000384743 110 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 MIR520F-201ENST00000384824 87 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 MIR106A-201ENST00000384870 81 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 RNU6-910P-201ENST00000390844 107 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 SNORA75.2-201ENST00000391138 150 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL079342.2-201ENST00000403367 482 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL353621.1-201ENST00000418219 243 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL160275.3-201ENST00000423876 471 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AC091021.1-201ENST00000468051 388 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL022345.1-201ENST00000607292 135 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 SUGT1P1-201ENST00000379514 476 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 RNU6-983P-201ENST00000516004 103 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 RNU6-798P-201ENST00000516912 103 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AC007151.1-201ENST00000572774 483 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 AL353778.1-201ENST00000603149 408 ntBASIC-0.26□□□□□ -2.45
COL6A5A8TX70 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 SNORA36.2-201ENST00000384004 127 ntBASIC-0.27□□□□□ -2.45
COL6A5A8TX70 RNU6-439P-201ENST00000384188 106 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms