Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 SNORD56.1-201ENST00000362913 68 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 SNORA40.18-201ENST00000391200 128 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNA5SP111-201ENST00000411386 101 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC010099.3-201ENST00000423896 409 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 MTND5P25-201ENST00000430499 799 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 HMGB1P31-201ENST00000437242 427 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 MTND1P30-201ENST00000441241 901 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL360271.2-201ENST00000447710 161 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 ZNF114P1-201ENST00000453500 292 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 RPL30P1-201ENST00000488676 339 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC116337.1-201ENST00000509680 687 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-295P-201ENST00000516901 104 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AP005597.4-201ENST00000526762 229 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC115990.1-201ENST00000526957 301 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AK6P1-201ENST00000540219 478 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 BNIP3P6-201ENST00000549284 499 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC009977.1-201ENST00000586015 570 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 BNIP3P8-201ENST00000597863 560 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC123912.5-201ENST00000605470 343 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 PRR13P7-201ENST00000605538 430 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC091834.1-201ENST00000614543 472 ntBASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNA5SP432-201ENST00000362480 116 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU1-62P-201ENST00000362599 164 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL031577.2-201ENST00000404133 280 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-607P-201ENST00000411283 108 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC007098.1-201ENST00000420122 367 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC013410.2-201ENST00000422627 201 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL590556.1-201ENST00000423231 483 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC007283.2-201ENST00000424739 197 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL035666.1-201ENST00000446195 348 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL353752.1-201ENST00000454946 260 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RPL30P12-201ENST00000474666 353 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC093259.1-201ENST00000509755 300 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-410P-201ENST00000517006 107 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC087883.1-201ENST00000551882 391 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC015712.3-201ENST00000559380 164 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 MIR4769-201ENST00000584126 77 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC078795.2-201ENST00000602835 1252 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AP001485.1-201ENST00000604799 199 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC079248.2-201ENST00000623779 326 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC019226.2-201ENST00000625973 424 ntBASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.46□□□□□ -2.18
COMMD3-BMI1R4GMX3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 U8.13-201ENST00000390842 128 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-482P-201ENST00000391068 107 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU1-78P-201ENST00000391248 165 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 SNORA26.9-201ENST00000391322 122 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RPL21P90-201ENST00000415692 466 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 VN1R108P-201ENST00000431580 830 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC073614.1-201ENST00000438690 650 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 snoU13.9-201ENST00000458927 103 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC005908.1-201ENST00000468701 347 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC104564.1-201ENST00000493028 407 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC025465.3-201ENST00000510570 311 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNVU1-2-201ENST00000516326 135 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-250P-201ENST00000516958 103 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 COPS8P3-201ENST00000526024 482 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC005771.1-201ENST00000585581 349 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC091135.1-201ENST00000585943 307 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 MIR6845-201ENST00000613182 61 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC131159.1-201ENST00000621854 213 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 AC241585.2-209ENST00000638217 143 ntBASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.45□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU5E-7P-201ENST00000365290 117 ntBASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-169P-201ENST00000365336 107 ntBASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-160P-201ENST00000384591 107 ntBASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.44□□□□□ -2.18
COMMD3-BMI1R4GMX3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms