Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-804P-201ENST00000384286 107 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 MIR329-1-201ENST00000385028 80 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RPL26P27-201ENST00000414397 437 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC016769.2-201ENST00000414815 475 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 HMGN2P30-201ENST00000423237 256 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 GPM6BP3-201ENST00000442797 145 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 HMGN2P21-201ENST00000447764 270 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 MRPS10P1-201ENST00000448483 130 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RPL37P4-201ENST00000448908 268 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 SNRPGP7-201ENST00000469016 106 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC084357.1-201ENST00000473404 255 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 SNORA40.9-201ENST00000515895 93 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1198P-201ENST00000516904 67 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-58P-201ENST00000517143 103 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 RPL21P9-201ENST00000556149 474 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AL391261.3-201ENST00000557194 520 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC019159.1-201ENST00000605094 187 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AL591034.3-201ENST00000605511 685 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AC073349.3-201ENST00000617616 186 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 U2.21-201ENST00000637295 81 ntBASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CAPN6Q9Y6Q1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 BX322639.1-202ENST00000423987 2213 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.8-201ENST00000362353 102 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-778P-201ENST00000363269 103 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RNU1-32P-201ENST00000363937 159 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RNU1-73P-201ENST00000383971 164 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-217P-201ENST00000384164 104 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MIR493-201ENST00000385254 89 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RPS26P8-201ENST00000393490 348 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RPL21P66-201ENST00000426566 466 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AC006989.1-201ENST00000427212 131 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RPL30P5-201ENST00000494923 336 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AC097462.2-201ENST00000504623 481 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 SNORA31.9-201ENST00000516429 84 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MTND5P41-201ENST00000517498 206 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MRPS18CP4-201ENST00000535821 231 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MIR5571-201ENST00000577998 113 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MIR3144-201ENST00000579460 79 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MIR492-201ENST00000638676 116 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CAPN6Q9Y6Q1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 Y_RNA.331-201ENST00000365267 102 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AP002088.1-201ENST00000382740 395 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 RNU6-1081P-201ENST00000384537 107 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 MIR487A-201ENST00000385009 80 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 RPL23AP36-201ENST00000413895 458 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AL451074.5-201ENST00000415894 435 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 RPL23AP3-201ENST00000453844 468 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 SNORD2.1-201ENST00000458762 69 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC016632.1-201ENST00000503994 196 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 HSPE1P4-201ENST00000550617 308 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 MIR4425-201ENST00000580572 84 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC007448.1-201ENST00000582714 234 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC005176.2-201ENST00000596933 147 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AP001485.1-201ENST00000604799 199 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC104465.1-201ENST00000611365 139 ntBASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
CAPN6Q9Y6Q1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CAPN6Q9Y6Q1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms