Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC022022.2-201ENST00000602989 360 ntBASIC0.84□□□□□ -2.28
SCN10AQ9Y5Y9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.84□□□□□ -2.28
SCN10AQ9Y5Y9 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.28
SCN10AQ9Y5Y9 MIR26B-201ENST00000362251 77 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-655P-201ENST00000362858 107 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 MIR320C1-201ENST00000408566 88 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RPL26P26-201ENST00000480251 434 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AC098862.1-201ENST00000504991 413 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 NIFKP6-201ENST00000598115 845 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 ICE2P2-201ENST00000483823 2787 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-112P-201ENST00000363599 104 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.458-201ENST00000384240 102 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AL133475.1-201ENST00000404414 305 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-1025P-201ENST00000410629 104 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 RNU2-62P-201ENST00000410868 191 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AL135790.2-201ENST00000437701 267 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 MTCO1P27-201ENST00000448269 226 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 MTCO3P27-201ENST00000514397 196 ntBASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SCN10AQ9Y5Y9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 RNU4-22P-201ENST00000411058 166 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 MTND4P15-201ENST00000437913 1033 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 RPL39P29-201ENST00000447779 157 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 HMGB1P30-201ENST00000492455 606 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 HMGN1P13-201ENST00000505795 138 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 AP003049.1-201ENST00000529418 457 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 AP003122.4-201ENST00000530980 758 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 SNORA77B-201ENST00000578179 125 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 AP001485.1-201ENST00000604799 199 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 AC124016.2-201ENST00000610058 665 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 SCARNA4-202ENST00000625402 129 ntBASIC0.82□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-853P-201ENST00000364306 107 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.534-201ENST00000384599 112 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-817P-201ENST00000391083 104 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 BTF3L4P1-201ENST00000413813 468 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC013410.2-201ENST00000422627 201 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC091925.1-201ENST00000623204 462 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 SNORA4.3-201ENST00000365564 137 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-939P-201ENST00000384634 107 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 MIR194-1-201ENST00000384892 85 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.623-201ENST00000411128 95 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 MTND4P3-201ENST00000417829 541 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AL365338.1-201ENST00000422282 858 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC093899.1-201ENST00000457984 376 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 RNU5F-2P-201ENST00000516066 82 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.681-201ENST00000516445 113 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 RNU6-64P-201ENST00000517119 105 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC137800.2-201ENST00000574375 120 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AL353778.1-201ENST00000603149 408 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AL354696.1-201ENST00000614652 497 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC092656.1-203ENST00000624134 423 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 MTND5P42-201ENST00000637720 498 ntBASIC0.81□□□□□ -2.28
SCN10AQ9Y5Y9 AC100821.1-201ENST00000523153 2479 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 MIR412-201ENST00000362142 91 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 SMIM11P1-201ENST00000369586 178 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 MTND2P4-201ENST00000445034 1004 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AC011005.2-201ENST00000487324 359 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 RNVU1-2-201ENST00000516326 135 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 MTND1P36-201ENST00000522384 936 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 MTATP6P2-201ENST00000603319 678 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 DPPA3P3-201ENST00000603842 430 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 MZT1P2-201ENST00000604387 248 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AC006270.3-201ENST00000605967 1036 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 AC099654.5-201ENST00000636479 350 ntBASIC0.8□□□□□ -2.28
SCN10AQ9Y5Y9 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 MIR301A-201ENST00000385261 86 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AL603865.2-201ENST00000401679 213 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 RN7SKP266-201ENST00000410232 287 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC016831.2-201ENST00000417179 352 ntBASIC0.79□□□□□ -2.28
SCN10AQ9Y5Y9 AC027119.1-201ENST00000440877 241 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms