Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RNU6-140P-201ENST00000384566 108 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 AC006026.2-201ENST00000457376 180 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 snoU13.4-201ENST00000458916 104 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RPS4XP22-201ENST00000480755 780 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 HMGB1P22-201ENST00000505315 124 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 MIR7702-201ENST00000621931 59 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU4-80P-201ENST00000363200 141 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 MIR124-3-201ENST00000384866 87 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU6-1168P-201ENST00000390831 104 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RPL21P17-201ENST00000397467 475 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU2-2P-201ENST00000410396 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 GPM6BP3-201ENST00000442797 145 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC009237.8-201ENST00000445492 379 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC005042.3-201ENST00000453230 174 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 snoU13.6-201ENST00000458785 104 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RPL23AP14-201ENST00000468281 468 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 SNORA31.8-201ENST00000516327 108 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU1-103P-201ENST00000516502 125 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 HSPE1P4-201ENST00000550617 308 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC007179.3-201ENST00000604976 235 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AL138963.2-201ENST00000605137 226 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU2-4P-201ENST00000606190 192 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.15-201ENST00000611544 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.16-201ENST00000613119 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.12-201ENST00000613778 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.9-201ENST00000615427 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.11-201ENST00000616345 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.2-201ENST00000616535 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.3-201ENST00000617785 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.19-201ENST00000618602 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 RNU2-1-201ENST00000618664 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.6-201ENST00000619225 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.5-201ENST00000619465 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 U2.10-201ENST00000620268 191 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX11Q9Y5W9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 RNU6-525P-201ENST00000363685 104 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.215-201ENST00000364204 112 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 MIR544A-201ENST00000384855 91 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 MIR518D-201ENST00000385014 87 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AL512844.2-201ENST00000433990 593 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 RNU6-426P-201ENST00000516464 97 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 SNORD116-25-201ENST00000516517 92 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 RNU6-703P-201ENST00000516946 107 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 ZNF192P1-203ENST00000565888 810 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AC022441.3-201ENST00000605737 136 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 RNA5SP108-201ENST00000605921 117 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 AL139811.1-201ENST00000424779 2299 ntBASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SNX11Q9Y5W9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX11Q9Y5W9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX11Q9Y5W9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX11Q9Y5W9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX11Q9Y5W9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms