Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 uc_338.34-201ENST00000617467 174 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC099654.12-201ENST00000639868 649 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-78P-201ENST00000362897 107 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-622P-201ENST00000384272 103 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA40.19-201ENST00000390846 128 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL606923.1-201ENST00000406616 190 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 SRIP2-201ENST00000428470 166 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL603825.1-201ENST00000438481 80 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU7-167P-201ENST00000459160 62 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-835P-201ENST00000516974 104 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RPL30P11-203ENST00000598995 310 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AC025754.2-201ENST00000606491 432 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 U4.7-201ENST00000638126 106 ntBASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHGA1Q9Y5H4 AC002543.1-201ENST00000299783 1954 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 MTND3P21-201ENST00000433774 331 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC090515.1-201ENST00000465295 476 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU2-53P-201ENST00000516257 147 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-720P-201ENST00000516363 108 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-506P-201ENST00000516553 94 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 CBX3P7-201ENST00000532876 502 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC023050.3-201ENST00000541142 333 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AL512360.1-201ENST00000555346 234 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC092954.2-201ENST00000609103 430 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 AC046143.2-201ENST00000609789 160 ntBASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHGA1Q9Y5H4 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-37P-201ENST00000362692 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-11P-201ENST00000364234 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-25P-201ENST00000383873 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-1-201ENST00000383898 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-48P-201ENST00000384161 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-36P-201ENST00000384172 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-4P-201ENST00000384205 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-5P-201ENST00000384238 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-3P-201ENST00000384314 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-16P-201ENST00000384385 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU1-148P-201ENST00000384472 162 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-15P-201ENST00000384534 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-2-201ENST00000384627 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-29P-201ENST00000384637 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-9-201ENST00000384776 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-33P-201ENST00000384793 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 MIR186-201ENST00000384988 86 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 CR769767.1-201ENST00000436337 346 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 HMGB1P18-201ENST00000438801 619 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 TPTE2P5-203ENST00000458118 728 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AC068781.1-201ENST00000488231 618 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RPL23AP49-201ENST00000492925 468 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 CCDC34P1-201ENST00000507441 517 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-586P-201ENST00000517265 104 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 EIF1P4-201ENST00000572664 335 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AC060766.3-201ENST00000591442 263 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-6P-201ENST00000606623 107 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 AC002044.1-201ENST00000606707 158 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 Z82243.1-201ENST00000609432 473 ntBASIC2.3□□□□□ -2.04
PCDHGA1Q9Y5H4 U2.17-201ENST00000611454 95 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms