Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDHGC4Q9Y5F7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU1-15P-201ENST00000353977 144 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-884P-201ENST00000363889 107 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-270P-201ENST00000364131 105 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-407P-201ENST00000365280 104 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 SNORA18.3-201ENST00000384122 132 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 Y_RNA.525-201ENST00000384570 113 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-476P-201ENST00000384726 107 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR1193-201ENST00000408109 78 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 BPY2DP-201ENST00000422208 265 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AC245047.8-201ENST00000456455 284 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RPL26P9-201ENST00000457466 433 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AC010618.1-201ENST00000469924 477 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AC105137.1-201ENST00000484355 562 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RN7SKP179-201ENST00000516126 217 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNA5SP76-201ENST00000516277 87 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-107P-201ENST00000516643 102 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 CYCSP29-201ENST00000533731 318 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AL356575.1-201ENST00000603008 283 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AL591034.3-201ENST00000605511 685 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AL354798.1-201ENST00000622505 329 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR3653-201ENST00000625572 110 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 AC027290.2-201ENST00000623210 18662 ntBASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHGC4Q9Y5F7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU1-108P-201ENST00000362556 161 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 RNA5SP28-201ENST00000363841 119 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR616-201ENST00000385293 97 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC012308.1-201ENST00000451232 178 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC090525.1-201ENST00000479116 478 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC134698.5-201ENST00000519444 336 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AP001328.1-201ENST00000528550 176 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 NACAP3-201ENST00000552100 481 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC009163.5-201ENST00000575421 637 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AL445567.2-201ENST00000618935 498 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AP001340.1-201ENST00000624405 217 ntBASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGC4Q9Y5F7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR383-201ENST00000362257 73 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU1-94P-201ENST00000362627 173 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-1180P-201ENST00000364935 107 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-1264P-201ENST00000383891 107 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-969P-201ENST00000383900 105 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 Y_RNA.415-201ENST00000384012 112 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 SNORA72.4-201ENST00000384174 132 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR320B2-201ENST00000408479 138 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AL357134.1-201ENST00000445848 426 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 HMGB3P8-201ENST00000449709 577 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RPS4XP13-201ENST00000483219 789 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AL592156.1-201ENST00000508758 304 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-581P-201ENST00000516214 105 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 MIR3613-201ENST00000579844 87 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AL451007.1-201ENST00000595491 289 ntBASIC4.28□□□□□ -1.72
PCDHGC4Q9Y5F7 AL391261.4-201ENST00000616012 481 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms