Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 MTATP6P30-201ENST00000443540 664 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 SUMO2P18-201ENST00000518873 252 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AP003327.1-201ENST00000529684 127 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AC023824.3-201ENST00000569003 562 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 MIR4782-201ENST00000577987 79 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 MIR4768-201ENST00000585270 74 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AC022022.2-201ENST00000602989 360 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AL031281.1-201ENST00000604049 488 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AC091946.2-201ENST00000606105 291 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 MIR3976-201ENST00000606807 139 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AL163051.2-201ENST00000618976 735 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 AC100810.6-201ENST00000638068 285 ntBASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.11□□□□□ -2.43
AP4S1Q9Y587 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 RNU4-67P-201ENST00000364569 141 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AL445305.1-201ENST00000432577 575 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 FABP5P4-201ENST00000437203 171 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AL132657.2-201ENST00000564417 358 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 VN1R83P-201ENST00000595685 445 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AC008759.3-201ENST00000613300 508 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AC063943.3-201ENST00000615562 356 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 AC019226.1-201ENST00000625666 515 ntBASIC-0.12□□□□□ -2.43
AP4S1Q9Y587 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 SNORD3E-201ENST00000362899 217 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 MIR32-201ENST00000384965 70 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 GTF2IP3-201ENST00000433887 494 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC092170.1-201ENST00000440211 356 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 RNFT1P2-201ENST00000443064 757 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 RAD1P2-201ENST00000446414 663 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 snoU13.14-201ENST00000459372 104 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC009646.1-201ENST00000510455 318 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 SNORA62.5-201ENST00000516634 120 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC023932.2-201ENST00000603176 175 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC106730.3-201ENST00000624568 641 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 SNORD3E-202ENST00000627253 216 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 AC004808.1-201ENST00000627671 721 ntBASIC-0.13□□□□□ -2.43
AP4S1Q9Y587 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 RNU6-288P-201ENST00000363690 104 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 MIR7-1-201ENST00000384871 110 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 RNU6-754P-201ENST00000391166 107 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AL596276.1-201ENST00000434465 418 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 BTF3P15-201ENST00000455606 336 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AC026410.2-201ENST00000460281 156 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 RNA5SP490-201ENST00000517141 136 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 SUMO2P16-201ENST00000519475 264 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AC016957.1-201ENST00000534895 309 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AC090615.1-201ENST00000577519 154 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 MIR4514-201ENST00000581410 57 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AF038458.1-201ENST00000588406 262 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 DBF4P1-201ENST00000412976 1892 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AL159152.1-201ENST00000635019 2587 ntBASIC-0.14□□□□□ -2.43
AP4S1Q9Y587 AC027514.1-201ENST00000588561 1603 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 SNORA63.3-201ENST00000362682 132 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 CALM2P3-201ENST00000400429 449 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AL357139.1-201ENST00000407792 426 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AL139421.1-201ENST00000423010 169 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 RPS15AP10-201ENST00000432472 382 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 RNU7-21P-201ENST00000459430 62 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 MED28P2-201ENST00000475771 317 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AC024589.1-201ENST00000512207 263 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AC022861.1-201ENST00000522981 663 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AC091805.2-201ENST00000603848 235 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 MIR6718-201ENST00000616153 80 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 AC007742.2-201ENST00000618226 398 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 MIR6734-201ENST00000621166 68 ntBASIC-0.15□□□□□ -2.43
AP4S1Q9Y587 RNU6-819P-201ENST00000364116 107 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 SNORA4.2-201ENST00000365313 147 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AL590084.2-201ENST00000401481 382 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 COX6CP10-201ENST00000416832 224 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC244098.3-201ENST00000424803 96 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 USP9YP14-201ENST00000430663 563 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 MTND5P14-201ENST00000441481 1267 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 SNRPGP9-201ENST00000456025 225 ntBASIC-0.16□□□□□ -2.44
AP4S1Q9Y587 AL162395.1-201ENST00000457882 422 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms