Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC005296.1-201ENST00000616145 209 ntBASIC1.88□□□□□ -2.11
CHMP2BQ9UQN3 AC099842.1-201ENST00000619919 596 ntBASIC1.88□□□□□ -2.11
CHMP2BQ9UQN3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
CHMP2BQ9UQN3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-293P-201ENST00000411259 106 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC092447.3-201ENST00000426027 686 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 RPL21P99-201ENST00000480369 423 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC008549.1-201ENST00000512900 643 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 LRRC34P2-201ENST00000514850 553 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC040904.1-201ENST00000590850 223 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC025449.1-201ENST00000603896 529 ntBASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHMP2BQ9UQN3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-428P-201ENST00000362942 107 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 SNORD14D-201ENST00000384390 87 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-692P-201ENST00000384496 107 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 SNORA16.2-201ENST00000390991 127 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 SRIP3-201ENST00000413200 219 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AL358934.1-201ENST00000432346 324 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 PRPS1P1-201ENST00000445305 876 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC132479.1-201ENST00000449160 144 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 C1DP4-201ENST00000455429 424 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC022364.2-201ENST00000457963 554 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RPL38P4-201ENST00000502376 214 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 RNU2-69P-201ENST00000516061 100 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AP001893.2-201ENST00000526949 202 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AP002963.1-201ENST00000530590 184 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AL356057.1-201ENST00000533798 831 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC010928.2-201ENST00000588017 287 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC005034.5-201ENST00000604219 466 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 uc_338.11-201ENST00000619132 160 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC136475.10-201ENST00000620253 385 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC022418.1-201ENST00000624118 445 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
CHMP2BQ9UQN3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL390237.1-201ENST00000404226 1415 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-336P-201ENST00000364891 107 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 RNU2-9P-201ENST00000410194 145 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 RN7SKP142-201ENST00000411236 328 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 CBX3P6-201ENST00000430257 527 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 MTCO2P11-201ENST00000431069 680 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC245102.2-201ENST00000448956 180 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 MTND1P27-201ENST00000451117 902 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 ANXA2P1-201ENST00000505539 926 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC093259.1-201ENST00000509755 300 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 SNORA25.17-201ENST00000517184 124 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AP005435.4-201ENST00000529514 284 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AL078605.1-201ENST00000603529 500 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AP000770.2-201ENST00000623694 100 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 SCARNA15.3-201ENST00000626315 122 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 SCARNA4.1-201ENST00000628597 123 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 AP006437.1-201ENST00000641440 3685 ntBASIC1.85□□□□□ -2.11
CHMP2BQ9UQN3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CHMP2BQ9UQN3 RNU4-15P-201ENST00000362613 141 ntBASIC1.84□□□□□ -2.11
CHMP2BQ9UQN3 RNU6-234P-201ENST00000365229 104 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms