Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 RNU6-743P-201ENST00000364151 106 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 RNU4-46P-201ENST00000410818 138 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AL139156.1-201ENST00000412785 841 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AL031667.1-201ENST00000440222 725 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC007969.2-201ENST00000441891 191 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 C1DP4-201ENST00000455429 424 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 PMCHL2-203ENST00000457791 237 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 snoU13.14-201ENST00000459372 104 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 SNRPGP7-201ENST00000469016 106 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 RNU6-377P-201ENST00000515965 102 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AP002963.1-201ENST00000530590 184 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 SUB1P2-201ENST00000556401 297 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 MIR4703-201ENST00000577728 79 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC121247.2-201ENST00000604776 136 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC072046.2-201ENST00000618366 268 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC009161.2-201ENST00000624626 138 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 U4.7-201ENST00000638126 106 ntBASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NPIPA1Q9UND3 AC008555.8-201ENST00000623602 2168 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AP000568.1-201ENST00000282964 442 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 RNU6-393P-201ENST00000384475 107 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 MIR518A2-201ENST00000384966 87 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 SNORD70.1-201ENST00000391007 85 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 RNU2-48P-201ENST00000410694 191 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AL445685.2-201ENST00000422551 342 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC096920.1-201ENST00000423991 241 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 RPL30P1-201ENST00000488676 339 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 MTND2P33-201ENST00000506452 1031 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC007834.2-201ENST00000536310 343 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC008536.2-201ENST00000607284 349 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AL159153.1-201ENST00000619688 317 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 AC078883.4-201ENST00000623218 367 ntBASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
NPIPA1Q9UND3 MIR29B2-201ENST00000385055 81 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 SNORA26.9-201ENST00000391322 122 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 MTND1P26-201ENST00000440488 538 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 PRPS1P1-201ENST00000445305 876 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC007677.1-201ENST00000445757 515 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC098862.1-201ENST00000504991 413 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 RN7SKP219-201ENST00000516825 296 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 OSBPL9P5-201ENST00000542581 171 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC091135.1-201ENST00000585943 307 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AC025449.1-201ENST00000603896 529 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 AL136363.2-201ENST00000604173 851 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NPIPA1Q9UND3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 RNA5SP450-201ENST00000411206 102 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 HMGB3P2-201ENST00000411913 584 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 MTND4P32-201ENST00000437189 1237 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 USP9YP29-201ENST00000445112 563 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.8□□□□□ -2.12
NPIPA1Q9UND3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms