Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC015540.1-201ENST00000615828 501 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AC007792.1-201ENST00000623023 402 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 Z69720.2-201ENST00000624755 279 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 MIR337-201ENST00000362281 93 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-37P-201ENST00000362692 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-11P-201ENST00000364234 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-25P-201ENST00000383873 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-1-201ENST00000383898 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-48P-201ENST00000384161 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-36P-201ENST00000384172 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-4P-201ENST00000384205 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-5P-201ENST00000384238 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-3P-201ENST00000384314 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-16P-201ENST00000384385 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-15P-201ENST00000384534 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-2-201ENST00000384627 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-29P-201ENST00000384637 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-9-201ENST00000384776 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-33P-201ENST00000384793 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 MIR583-201ENST00000384846 75 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 SNORA16.2-201ENST00000390991 127 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 AP000705.1-201ENST00000454567 350 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 AC009646.1-201ENST00000510455 318 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-377P-201ENST00000515965 102 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 AC069113.1-201ENST00000517763 267 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 PSMA3P-201ENST00000555485 635 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-6P-201ENST00000606623 107 ntBASIC4.01□□□□□ -1.77
SHROOM4Q9ULL8 Y_RNA.381-201ENST00000365666 102 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 DNAJC19P4-201ENST00000440115 345 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 AC083798.1-201ENST00000472671 131 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 SNORA31.23-201ENST00000517219 133 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 uc_338.34-201ENST00000617467 174 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 AC068792.1-201ENST00000621354 417 ntBASIC4□□□□□ -1.77
SHROOM4Q9ULL8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM4Q9ULL8 RNA5SP240-201ENST00000365355 128 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 SNORD37.1-201ENST00000390968 65 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 AC011753.1-201ENST00000451001 220 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 MTCO3P9-201ENST00000506989 781 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 AC109479.2-201ENST00000517842 174 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 MTCO3P23-201ENST00000561363 289 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 SNRPGP19-201ENST00000603826 189 ntBASIC3.99□□□□□ -1.77
SHROOM4Q9ULL8 MIR378A-201ENST00000362177 66 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-1010P-201ENST00000362757 107 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 SNORA26.7-201ENST00000391288 122 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNU7-167P-201ENST00000459160 62 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC073901.1-201ENST00000462471 408 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 SMURF2P1-201ENST00000514992 481 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 SNORA40.12-201ENST00000516329 111 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC136619.2-201ENST00000563361 631 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AL356575.1-201ENST00000603008 283 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 uc_338.15-201ENST00000615470 191 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-622P-201ENST00000384272 103 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNU7-26P-201ENST00000458980 63 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNU7-180P-201ENST00000459240 63 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 snoU13.18-201ENST00000459483 104 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AC117503.1-201ENST00000472241 394 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 RNA5SP401-201ENST00000515920 127 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AL512360.1-201ENST00000555346 234 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 Y_RNA.783-201ENST00000613546 102 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 AL359880.1-201ENST00000621879 266 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 U4.7-201ENST00000638126 106 ntBASIC3.98□□□□□ -1.77
SHROOM4Q9ULL8 SNORD56.1-201ENST00000362913 68 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 RNU4-75P-201ENST00000364621 146 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 AL354685.2-201ENST00000448218 1447 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 AC091885.1-201ENST00000506658 268 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 RNA5SP182-201ENST00000516064 82 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 RNU6-314P-201ENST00000516574 104 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 CYCSP27-201ENST00000527643 293 ntBASIC3.97□□□□□ -1.77
SHROOM4Q9ULL8 AC023050.3-201ENST00000541142 333 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms