Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC007969.2-201ENST00000441891 191 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 MRPL42P6-201ENST00000486397 371 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 RPL23AP75-201ENST00000491601 451 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA67.7-201ENST00000516664 135 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 CKS1BP7-201ENST00000522230 235 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 HSPE1P20-201ENST00000538133 289 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AL391261.3-201ENST00000557194 520 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 MIR3158-1-201ENST00000583596 81 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC078899.3-201ENST00000599065 212 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AL355877.2-201ENST00000603670 358 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC137590.2-201ENST00000619709 240 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AP003355.3-201ENST00000623465 114 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC073308.1-201ENST00000623696 305 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA62.3-201ENST00000365110 153 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.358-201ENST00000365491 99 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RNA5SP44-201ENST00000410446 133 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RNA5SP38-201ENST00000410750 119 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RPL21P40-201ENST00000428586 483 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC009296.1-201ENST00000443146 155 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AL353705.4-201ENST00000449661 238 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 SNORD127-201ENST00000458892 86 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA84-201ENST00000459229 133 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC026784.1-201ENST00000507986 352 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC104619.4-201ENST00000510773 249 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-928P-201ENST00000516876 104 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC021739.1-201ENST00000559631 174 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC009163.5-201ENST00000575421 637 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC020895.1-201ENST00000595362 272 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AC006133.1-201ENST00000617106 264 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AL034408.1-202ENST00000636088 415 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 ZNF826P-207ENST00000622273 1910 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 MFSD8-233ENST00000641482 4860 ntBASIC3.69□□□□□ -1.82
PPARGC1AQ9UBK2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.222-201ENST00000364264 102 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.458-201ENST00000384240 102 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 FTH1P15-201ENST00000406984 280 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AL031659.1-201ENST00000447075 539 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-1132P-201ENST00000459214 107 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 MED28P2-201ENST00000475771 317 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-397P-201ENST00000516226 104 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AP003733.2-201ENST00000529409 171 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 MIR7851-201ENST00000610611 160 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AL138880.2-201ENST00000616214 239 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 AC097372.5-201ENST00000623665 376 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PPARGC1AQ9UBK2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AC110774.1-201ENST00000623567 2018 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.64-201ENST00000362845 102 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 SNORD56.1-201ENST00000362913 68 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-137P-201ENST00000363680 108 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.257-201ENST00000364596 102 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.376-201ENST00000365638 108 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.447-201ENST00000384184 113 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-843P-201ENST00000384454 104 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.562-201ENST00000384695 113 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 MIR200C-201ENST00000384980 68 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 MIR153-2-201ENST00000385225 87 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 MT-TW-201ENST00000387382 68 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RN7SKP61-201ENST00000410642 295 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RPL23AP82-202ENST00000427528 469 ntBASIC3.67□□□□□ -1.82
PPARGC1AQ9UBK2 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms