Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP000560.1-201ENST00000624150 1937 ntBASIC2.93□□□□□ -1.94
LRFN1Q9P244 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LRFN1Q9P244 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LRFN1Q9P244 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LRFN1Q9P244 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LRFN1Q9P244 Y_RNA.11-201ENST00000362375 109 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 SNORD62.1-201ENST00000362541 86 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RNU6-212P-201ENST00000362642 104 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RNU6-1210P-201ENST00000363775 107 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LRFN1Q9P244 AL138885.1-201ENST00000405921 675 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RN7SKP61-201ENST00000410642 295 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RNA5SP229-201ENST00000410809 99 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.92□□□□□ -1.94
LRFN1Q9P244 MTND4P28-201ENST00000426217 387 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.92□□□□□ -1.94
LRFN1Q9P244 AC025750.2-201ENST00000442609 450 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 AC107399.1-201ENST00000451226 265 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.92□□□□□ -1.94
LRFN1Q9P244 AL121594.1-201ENST00000475906 575 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RPL30P1-201ENST00000488676 339 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 PTP4A1P4-201ENST00000512479 322 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 AC091826.1-201ENST00000514065 313 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RNU2-53P-201ENST00000516257 147 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 MIR2276-201ENST00000516886 89 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 AP005902.1-201ENST00000521358 186 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.92□□□□□ -1.94
LRFN1Q9P244 MIR4795-201ENST00000584182 89 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 uc_338.25-201ENST00000613756 156 ntBASIC2.92□□□□□ -1.94
LRFN1Q9P244 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
LRFN1Q9P244 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LRFN1Q9P244 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 MIR30E-201ENST00000362104 92 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 RNU6-655P-201ENST00000362858 107 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LRFN1Q9P244 MIR548K-201ENST00000408406 116 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 RNU2-25P-201ENST00000411041 191 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC074085.1-201ENST00000413598 418 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC078809.1-201ENST00000427601 140 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AL133396.1-201ENST00000432048 687 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 DAP3P1-201ENST00000441522 278 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 FTH1P25-201ENST00000447665 469 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 MTND5P5-201ENST00000503764 376 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 RNU6-277P-201ENST00000516272 106 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 Y_RNA.675-201ENST00000516389 149 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 Y_RNA.691-201ENST00000516611 103 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AP002404.1-201ENST00000532005 451 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC022080.3-201ENST00000544433 482 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC093027.1-201ENST00000546698 429 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 UBL5P2-201ENST00000583788 219 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AC078795.3-201ENST00000602913 472 ntBASIC2.91□□□□□ -1.94
LRFN1Q9P244 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.91□□□□□ -1.94
LRFN1Q9P244 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LRFN1Q9P244 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LRFN1Q9P244 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.9□□□□□ -1.94
LRFN1Q9P244 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
LRFN1Q9P244 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 Y_RNA.151-201ENST00000363566 112 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 Y_RNA.813-201ENST00000364639 102 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 Y_RNA.339-201ENST00000365325 102 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 Y_RNA.474-201ENST00000384341 102 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 Y_RNA.535-201ENST00000384612 99 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 SNORA26.3-201ENST00000391119 136 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 CBX3P9-201ENST00000402326 552 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 PCMTD1P1-201ENST00000455560 355 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 RPS27P27-201ENST00000498779 255 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 RNU1-54P-201ENST00000517181 120 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC018889.1-201ENST00000605372 397 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 MIR8076-201ENST00000611401 83 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 AL161423.1-201ENST00000613700 262 ntBASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LRFN1Q9P244 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
LRFN1Q9P244 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.89□□□□□ -1.95
LRFN1Q9P244 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRFN1Q9P244 U3.6-201ENST00000363622 211 ntBASIC2.89□□□□□ -1.95
LRFN1Q9P244 SNORA80A-201ENST00000363922 136 ntBASIC2.89□□□□□ -1.95
LRFN1Q9P244 U8.8-201ENST00000365399 135 ntBASIC2.89□□□□□ -1.95
LRFN1Q9P244 RNU6-790P-201ENST00000384479 105 ntBASIC2.89□□□□□ -1.95
LRFN1Q9P244 SNORD15B-201ENST00000384714 146 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms