Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC245166.1-201ENST00000521012 253 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 CKS1BP7-201ENST00000522230 235 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 AL356157.2-201ENST00000605122 111 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 MIR8076-201ENST00000611401 83 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 uc_338.14-201ENST00000613162 166 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC098657.3-201ENST00000620434 263 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC092593.1-201ENST00000515413 1815 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 RNU6-227P-201ENST00000362865 103 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 Y_RNA.813-201ENST00000364639 102 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 Y_RNA.315-201ENST00000365117 102 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 RNU6-596P-201ENST00000365395 98 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 MIR521-1-201ENST00000384902 87 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 BTF3L4P2-201ENST00000392798 346 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL20A1Q9P218 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AL133396.1-201ENST00000432048 687 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL20A1Q9P218 SNORD109B-201ENST00000458961 67 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 Y_RNA.653-201ENST00000459091 95 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 SNORD109A-201ENST00000459128 67 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 HMGN1P13-201ENST00000505795 138 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC026782.1-201ENST00000512952 449 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 SNORA31.23-201ENST00000517219 133 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC090617.7-201ENST00000623952 126 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC138627.2-201ENST00000624202 601 ntBASIC3.18□□□□□ -1.9
COL20A1Q9P218 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
COL20A1Q9P218 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL20A1Q9P218 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 KPNA2P1-201ENST00000458289 1591 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 RBBP8P1-201ENST00000449447 1844 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 RNU6-1188P-201ENST00000363795 107 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 RNY4P36-201ENST00000391116 96 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 Y_RNA.594-201ENST00000410373 140 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 RN7SKP58-201ENST00000411010 305 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 RNA5SP184-201ENST00000411071 108 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AP000275.1-201ENST00000411943 390 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC009414.1-201ENST00000427200 443 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 USP9YP30-201ENST00000430729 455 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 PTP4A1P4-201ENST00000512479 322 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 Y_RNA.718-201ENST00000517110 102 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 APOOP3-201ENST00000536787 586 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC005899.2-201ENST00000584353 90 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC078795.3-201ENST00000602913 472 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AP001836.1-201ENST00000604675 523 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AP000654.2-201ENST00000605633 586 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC022140.2-201ENST00000623500 188 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC097372.5-201ENST00000623665 376 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
COL20A1Q9P218 AC241585.2-209ENST00000638217 143 ntBASIC3.17□□□□□ -1.9
COL20A1Q9P218 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL20A1Q9P218 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL20A1Q9P218 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.16□□□□□ -1.9
COL20A1Q9P218 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL20A1Q9P218 MIR449A-201ENST00000362113 91 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 U8.8-201ENST00000365399 135 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 MIR512-1-201ENST00000384913 84 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL20A1Q9P218 SNORA75.4-201ENST00000391278 119 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.16□□□□□ -1.9
COL20A1Q9P218 AC243964.1-201ENST00000441814 261 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 AC007969.2-201ENST00000441891 191 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
COL20A1Q9P218 AC105137.2-201ENST00000569073 466 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 MIR3976-201ENST00000606807 139 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 AL050343.2-201ENST00000607338 280 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 MTND4LP32-201ENST00000636111 270 ntBASIC3.16□□□□□ -1.9
COL20A1Q9P218 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms