Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-790P-201ENST00000384479 105 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU6-95P-201ENST00000384697 107 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU2-23P-201ENST00000410545 195 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AL030996.1-201ENST00000411430 235 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MTCO3P46-201ENST00000425787 232 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MTND3P9-201ENST00000429526 346 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC092427.1-202ENST00000430569 476 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MICF-203ENST00000432679 129 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 SNAP23P1-201ENST00000433229 246 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC098614.3-201ENST00000438957 440 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AL135938.1-201ENST00000443141 297 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU7-187P-201ENST00000458985 68 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MTCO1P29-201ENST00000496868 288 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC046134.1-201ENST00000514454 666 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNA5SP76-201ENST00000516277 87 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU6-566P-201ENST00000516790 107 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU7-30P-201ENST00000516835 62 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 SNORA20.3-201ENST00000516880 132 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 RNU6-612P-201ENST00000516909 102 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 MIR548S-201ENST00000581352 82 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AC105245.1-201ENST00000581934 244 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AL356280.1-201ENST00000603614 379 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HCN3Q9P1Z3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 RNU6-845P-201ENST00000362578 103 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 MIR186-201ENST00000384988 86 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AL139396.1-201ENST00000421137 167 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 RNU2-53P-201ENST00000516257 147 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 RNA5SP454-201ENST00000517231 127 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AC118273.2-201ENST00000532092 465 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 HPRT1P3-201ENST00000539521 576 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 MIR4790-201ENST00000577799 79 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AC023043.3-201ENST00000593113 385 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AC116312.1-201ENST00000606841 314 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AL022345.1-201ENST00000607292 135 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 AL133216.2-202ENST00000634512 349 ntBASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
HCN3Q9P1Z3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 SNORA72.1-201ENST00000363485 129 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RNU6-43P-201ENST00000384302 107 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 MIR521-1-201ENST00000384902 87 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 EIF4EP4-201ENST00000424916 578 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AL645568.3-201ENST00000433683 316 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 MTND1P11-201ENST00000456661 876 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RN7SL429P-201ENST00000479090 223 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RN7SL489P-201ENST00000486185 223 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RN7SL327P-201ENST00000488659 223 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RN7SKP40-201ENST00000517211 242 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AC109329.1-201ENST00000518744 317 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AL121579.1-201ENST00000555129 305 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AP001836.1-201ENST00000604675 523 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 AL033523.1-201ENST00000605153 153 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 RN7SL853P-201ENST00000617250 223 ntBASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.7□□□□□ -1.98
HCN3Q9P1Z3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 RNU6-655P-201ENST00000362858 107 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 Y_RNA.303-201ENST00000364998 94 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 RNU6-220P-201ENST00000390919 107 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 U6atac.2-201ENST00000408644 118 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 RN7SKP32-201ENST00000410167 303 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 AC008267.5-201ENST00000424928 265 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 Z82205.1-201ENST00000428456 297 ntBASIC2.69□□□□□ -1.98
HCN3Q9P1Z3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms