Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 AC006065.5-201ENST00000623427 349 ntBASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
LMCD1Q9NZU5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNU6-222P-201ENST00000362438 107 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNU4-90P-201ENST00000362773 141 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNU6-227P-201ENST00000362865 103 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNA5SP399-201ENST00000364003 117 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 SNORD116-18-201ENST00000383961 92 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.623-201ENST00000411128 95 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RPS26P21-201ENST00000475397 348 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNU6-377P-201ENST00000515965 102 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 MIR2355-201ENST00000517199 87 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AC027288.2-201ENST00000553028 243 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RNA5SP108-201ENST00000605921 117 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 MIR486-1-201ENST00000612171 68 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 MTND1P7-201ENST00000632801 297 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 AC100821.1-201ENST00000523153 2479 ntBASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LMCD1Q9NZU5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.286-201ENST00000364813 102 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.435-201ENST00000384095 112 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 RNU6-1035P-201ENST00000384477 107 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 ATP5A1P2-201ENST00000412323 255 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 RNU4-57P-201ENST00000515980 135 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 RNU1-103P-201ENST00000516502 125 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AC025755.1-201ENST00000521306 278 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 AC090617.3-201ENST00000573670 475 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 MIR5047-201ENST00000579212 100 ntBASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LMCD1Q9NZU5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 RNU6-1301P-201ENST00000362724 104 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 RNU4-30P-201ENST00000410245 143 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 RPS12P23-201ENST00000419579 400 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AL358453.1-201ENST00000422522 250 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 BX510359.1-201ENST00000456973 237 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 snoU109.2-201ENST00000459316 135 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AP001324.2-201ENST00000461163 319 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC097462.2-201ENST00000504623 481 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AP006245.1-201ENST00000522549 120 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC005476.1-201ENST00000554427 397 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC233702.2-202ENST00000562547 291 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AL162424.1-201ENST00000602325 221 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMCD1Q9NZU5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RNA5SP50-201ENST00000363731 107 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.272-201ENST00000364696 102 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 RNA5SP51-201ENST00000364750 119 ntBASIC4.1□□□□□ -1.75
LMCD1Q9NZU5 Y_RNA.488-201ENST00000384403 102 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms