Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC091965.4-201ENST00000607691 587 ntBASIC0.88□□□□□ -2.27
CISHQ9NSE2 MIR6504-201ENST00000613520 61 ntBASIC0.88□□□□□ -2.27
CISHQ9NSE2 AC022513.1-201ENST00000624512 117 ntBASIC0.88□□□□□ -2.27
CISHQ9NSE2 AC068205.3-201ENST00000636385 468 ntBASIC0.88□□□□□ -2.27
CISHQ9NSE2 LINC02555-201ENST00000563933 1951 ntBASIC0.88□□□□□ -2.27
CISHQ9NSE2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 Y_RNA.332-201ENST00000365271 113 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 SNORD114-22-201ENST00000365423 72 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 RNU6-360P-201ENST00000390944 104 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 RNU2-72P-201ENST00000411175 163 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 BTF3L4P1-201ENST00000413813 468 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC092809.3-201ENST00000415453 231 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 AL117351.1-201ENST00000438864 766 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 TAF9P1-201ENST00000445421 515 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 TAF9P2-201ENST00000454958 515 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 snoU109.2-201ENST00000459316 135 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC079140.2-201ENST00000506193 142 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC112198.4-201ENST00000515450 351 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 SNORA3.4-201ENST00000515969 96 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 RNU7-40P-201ENST00000516397 64 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 SNORA43.2-201ENST00000516652 128 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 AP005136.1-201ENST00000579765 429 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 MIR3146-201ENST00000580367 79 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 MIR544B-201ENST00000582372 78 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC144521.1-201ENST00000607148 956 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AL355816.2-201ENST00000610049 647 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC006386.1-201ENST00000619436 415 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.87□□□□□ -2.27
CISHQ9NSE2 AC099786.3-201ENST00000565735 1410 ntBASIC0.87□□□□□ -2.27
CISHQ9NSE2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CISHQ9NSE2 SNORD114-6-201ENST00000364393 72 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 RNY3P13-201ENST00000365542 102 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 RNU6-723P-201ENST00000383973 107 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 EBAG9P1-201ENST00000418955 543 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 C8orf59P1-201ENST00000429930 303 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 RPL9P9-202ENST00000466501 579 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 AC009646.1-201ENST00000510455 318 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 AC116353.3-201ENST00000511215 249 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 AC112206.3-201ENST00000514578 389 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 AC010376.1-201ENST00000522101 334 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 AL391001.1-201ENST00000602747 715 ntBASIC0.86□□□□□ -2.27
CISHQ9NSE2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CISHQ9NSE2 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 SNORD116-12-201ENST00000384468 92 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 RNU4-22P-201ENST00000411058 166 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 EIF1P1-201ENST00000421436 341 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CISHQ9NSE2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AL008629.1-201ENST00000438615 184 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 ATP5EP1-201ENST00000510257 156 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC010587.2-201ENST00000511727 448 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 RNU2-10P-201ENST00000516375 211 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 Y_RNA.687-201ENST00000516558 91 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 RNA5SP490-201ENST00000517141 136 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC091163.3-201ENST00000518269 1144 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 CENPUP1-201ENST00000526649 1202 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 MTND4LP25-201ENST00000570218 163 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 PART1_2.1-201ENST00000612397 250 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 AC063943.3-201ENST00000615562 356 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 U6.42-201ENST00000618440 107 ntBASIC0.85□□□□□ -2.27
CISHQ9NSE2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CISHQ9NSE2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CISHQ9NSE2 SNORA25.9-201ENST00000365087 128 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 RNU6-26P-201ENST00000383985 107 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 Y_RNA.465-201ENST00000384293 102 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 PIGPP2-201ENST00000411569 458 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC006366.1-201ENST00000422002 759 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 RPL39P29-201ENST00000447779 157 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 OR2AQ1P-201ENST00000451972 200 ntBASIC0.84□□□□□ -2.27
CISHQ9NSE2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.84□□□□□ -2.27
CISHQ9NSE2 AC005741.1-201ENST00000511094 432 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 306.7 ms