Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 MIR3664-201ENST00000579074 99 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 AC009977.1-201ENST00000586015 570 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 VN1R80P-201ENST00000597126 338 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 AC018889.1-201ENST00000605372 397 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 AC024060.1-201ENST00000607052 494 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 AL512506.1-201ENST00000613918 449 ntBASIC0.73□□□□□ -2.29
CTNNBIP1Q9NSA3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 MIR222-201ENST00000384992 110 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RNU6-1176P-201ENST00000390955 107 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 AP1B1P2-201ENST00000416196 106 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 PIGFP2-201ENST00000421400 651 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 AC099677.2-201ENST00000436385 175 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RN7SL429P-201ENST00000479090 223 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RN7SL489P-201ENST00000486185 223 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RN7SL327P-201ENST00000488659 223 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 ACA64.5-201ENST00000516207 127 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 Y_RNA.689-201ENST00000516589 107 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 RN7SL853P-201ENST00000617250 223 ntBASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.72□□□□□ -2.29
CTNNBIP1Q9NSA3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 RNY3P13-201ENST00000365542 102 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU5E-6P-201ENST00000365574 115 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-331P-201ENST00000384724 107 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 SNORA12-201ENST00000391162 147 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC004965.1-201ENST00000413033 213 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC108667.1-201ENST00000428618 249 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 SNRPEP8-201ENST00000442866 260 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 RPS4XP11-201ENST00000446897 772 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 ATP5J2P3-201ENST00000451550 258 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC021146.8-201ENST00000507455 733 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC115990.1-201ENST00000526957 301 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC107304.1-201ENST00000604229 296 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AL512427.1-201ENST00000618593 349 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AL138955.1-201ENST00000622881 1040 ntBASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CTNNBIP1Q9NSA3 AL391987.6-201ENST00000305671 199 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-511P-201ENST00000363496 107 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AC007969.2-201ENST00000441891 191 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 RPS27P1-201ENST00000450552 247 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR3146-201ENST00000580367 79 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AC008088.1-201ENST00000580993 280 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 BNIP3P8-201ENST00000597863 560 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR3976-201ENST00000606807 139 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AC040896.1-201ENST00000613819 479 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AC083806.3-201ENST00000614016 455 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 AL353997.5-201ENST00000618886 171 ntBASIC0.7□□□□□ -2.3
CTNNBIP1Q9NSA3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR378A-201ENST00000362177 66 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-960P-201ENST00000364056 120 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-438P-201ENST00000365561 103 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR19B1-201ENST00000384829 87 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RN7SKP61-201ENST00000410642 295 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 MTCO3P29-201ENST00000432119 779 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RPL23AP30-201ENST00000432419 501 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AL117351.1-201ENST00000438864 766 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC069257.2-201ENST00000441819 155 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 ART2BP-201ENST00000453501 499 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC112198.4-201ENST00000515450 351 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 MIR548AC-201ENST00000585049 88 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AL034555.1-201ENST00000604816 211 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-88P-201ENST00000606801 100 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 AC068647.2-201ENST00000637380 353 ntBASIC0.69□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU4-15P-201ENST00000362613 141 ntBASIC0.68□□□□□ -2.3
CTNNBIP1Q9NSA3 RNU6-862P-201ENST00000362804 105 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms