Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 Y_RNA.578-201ENST00000390903 88 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SNORA12-201ENST00000391162 147 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNA5SP390-201ENST00000410191 113 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC139712.2-201ENST00000424302 339 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 UBE2V1P8-201ENST00000437166 265 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 CR769776.1-201ENST00000441254 787 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 BTBD7P2-201ENST00000441962 620 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 MTCO1P27-201ENST00000448269 226 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC132479.1-201ENST00000449160 144 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC087894.1-201ENST00000538359 518 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 BNIP3P31-201ENST00000604515 566 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC022893.3-201ENST00000607665 437 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SCARNA4-202ENST00000625402 129 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-271P-201ENST00000363858 105 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNU5A-8P-201ENST00000364102 114 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNY3P13-201ENST00000365542 102 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SNORA22-201ENST00000383907 134 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SNORA29-201ENST00000384183 140 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SNORA22C-201ENST00000384614 134 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC069257.2-201ENST00000441819 155 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RPL30P1-201ENST00000488676 339 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 SUMO2P5-201ENST00000506790 245 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 MIR3169-201ENST00000578032 83 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 MIR5094-201ENST00000578766 85 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AL365434.2-201ENST00000607979 234 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC012676.2-201ENST00000619258 186 ntBASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 AC245060.5-201ENST00000610778 3293 ntBASIC0.65□□□□□ -2.3
KIAA1549Q9HCM3 MIR26B-201ENST00000362251 77 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 Y_RNA.99-201ENST00000363138 105 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-743P-201ENST00000364151 106 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL590556.1-201ENST00000423231 483 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC005730.3-201ENST00000583067 366 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC005786.1-201ENST00000588553 154 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AP002802.2-201ENST00000605877 235 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL512427.1-201ENST00000618593 349 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL356596.1-201ENST00000624230 379 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 MIR412-201ENST00000362142 91 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-487P-201ENST00000365430 104 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 MIR186-201ENST00000384988 86 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 BTF3L4P1-201ENST00000413813 468 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 EIF1P1-201ENST00000421436 341 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 snoU13.9-201ENST00000458927 103 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 BNIP3P26-201ENST00000600827 554 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC022022.2-201ENST00000602989 360 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 MZT1P2-201ENST00000604387 248 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL355816.2-201ENST00000610049 647 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC245297.2-201ENST00000610119 565 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC023158.2-201ENST00000614876 543 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL359547.2-201ENST00000615810 418 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC095038.3-201ENST00000634439 195 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 MTND5P42-201ENST00000637720 498 ntBASIC0.65□□□□□ -2.31
KIAA1549Q9HCM3 AL391516.1-201ENST00000554380 2449 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC092104.1-201ENST00000497346 1441 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1164P-201ENST00000364428 107 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-946P-201ENST00000383878 107 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 Y_RNA.472-201ENST00000384322 102 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 USP9YP35-201ENST00000435696 412 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 JTBP1-201ENST00000441314 247 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-953P-201ENST00000459154 107 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC114982.1-201ENST00000469402 321 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC011005.2-201ENST00000487324 359 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC021146.2-201ENST00000504736 556 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 MTCO3P28-201ENST00000513351 515 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms