Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC096638.1-201ENST00000444678 216 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AC006026.2-201ENST00000457376 180 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RN7SL542P-201ENST00000467147 294 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1278P-201ENST00000516130 107 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNA5SP164-201ENST00000516533 110 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 RNU1-45P-201ENST00000517191 141 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AL137849.1-201ENST00000604767 169 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 FTX_3.1-201ENST00000610451 147 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 SNORA43.4-201ENST00000629559 138 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AC010733.2-201ENST00000589496 5702 ntBASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SEC61A2Q9H9S3 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SNORA25.1-201ENST00000362326 128 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1020P-201ENST00000363684 107 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-961P-201ENST00000363893 105 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SNORD32A-201ENST00000364805 84 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-20P-201ENST00000384106 107 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 MIR10B-201ENST00000385011 110 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SNORA11-201ENST00000408789 128 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNU5A-5P-201ENST00000411054 116 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RPL23AP3-201ENST00000453844 468 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC073901.1-201ENST00000462471 408 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RN7SL132P-201ENST00000478131 296 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SNORA70.14-201ENST00000516205 110 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1212P-201ENST00000517023 104 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC027288.2-201ENST00000553028 243 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC034105.4-201ENST00000568304 277 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC006130.2-201ENST00000586202 326 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 Z83818.1-201ENST00000603584 150 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 AC024581.2-201ENST00000619986 252 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.36□□□□□ -1.87
SEC61A2Q9H9S3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 ZNF826P-207ENST00000622273 1910 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-600P-201ENST00000362524 99 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RNA5SP124-201ENST00000362739 110 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-884P-201ENST00000363889 107 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 U1.1-201ENST00000384101 164 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 SNORA36A-201ENST00000384221 132 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 MIR544A-201ENST00000384855 91 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RNU2-61P-201ENST00000411069 191 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC017083.1-201ENST00000428093 483 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 SNORA71B-202ENST00000439232 272 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RPL26P26-201ENST00000480251 434 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RAC1P2-201ENST00000511164 579 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-567P-201ENST00000516746 107 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC023632.4-201ENST00000517783 191 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 HSPE1P4-201ENST00000550617 308 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 RPL21P9-201ENST00000556149 474 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC008749.1-201ENST00000597650 306 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AL078605.1-201ENST00000603529 500 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 U2.21-201ENST00000637295 81 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 AC132825.6-201ENST00000638861 357 ntBASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SEC61A2Q9H9S3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-778P-201ENST00000363269 103 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 SNORA7.2-201ENST00000364446 145 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-923P-201ENST00000364753 107 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU1-73P-201ENST00000383971 164 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-142P-201ENST00000384019 107 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-217P-201ENST00000384164 104 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-514P-201ENST00000384208 107 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-281P-201ENST00000384212 103 ntBASIC3.34□□□□□ -1.87
SEC61A2Q9H9S3 U8.10-201ENST00000384260 133 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms