Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL139109.1-201ENST00000455491 297 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC139453.3-201ENST00000493276 369 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU6-572P-201ENST00000516724 80 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU6-703P-201ENST00000516946 107 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNA5SP165-201ENST00000517142 115 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC136601.2-201ENST00000604356 474 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC090617.7-201ENST00000623952 126 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 SCARNA4-201ENST00000629045 128 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC007785.2-201ENST00000598627 1916 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.297-201ENST00000364950 91 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.464-201ENST00000384282 110 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 RN7SKP111-201ENST00000410349 271 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 RNU2-68P-201ENST00000410878 191 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AL358453.1-201ENST00000422522 250 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AC092047.1-201ENST00000424997 240 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 NDUFS5P3-201ENST00000450668 321 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 FCF1P8-201ENST00000510322 597 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 RNU6-1212P-201ENST00000517023 104 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 SNORA31.18-201ENST00000517043 134 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 DEFB108E-201ENST00000524692 240 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 CASP1P1-201ENST00000526345 212 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 MIR4276-201ENST00000584832 70 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AC012493.2-201ENST00000595083 291 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AC099506.2-201ENST00000623074 221 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 AL450472.1-202ENST00000637286 180 ntBASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BCAS3Q9H6U6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 MIR30E-201ENST00000362104 92 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 RNA5SP374-201ENST00000362939 125 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 RNU6-105P-201ENST00000363909 104 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 SNORD115-32-201ENST00000364079 82 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 RNU6-17P-201ENST00000384245 107 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 RNU6-18P-201ENST00000384527 107 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 SNORD78.2-201ENST00000391076 69 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AL445305.1-201ENST00000432577 575 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 Z82210.1-201ENST00000440037 231 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 snoU13.30-201ENST00000458951 104 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 MIR5680-201ENST00000577577 84 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AC024153.1-201ENST00000603103 365 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AC240442.1-201ENST00000616055 283 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AC127459.3-201ENST00000624328 466 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 AC008568.2-201ENST00000623862 2313 ntBASIC3.78□□□□□ -1.8
BCAS3Q9H6U6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNU6-1301P-201ENST00000362724 104 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 Y_RNA.200-201ENST00000364018 102 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNU6-746P-201ENST00000384112 109 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 Y_RNA.541-201ENST00000384640 113 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 PCNPP3-201ENST00000393579 471 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AL079342.1-201ENST00000401460 267 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNA5SP31-201ENST00000411144 127 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AC007560.1-201ENST00000426912 237 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 SNRPEP9-201ENST00000436794 238 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AC009237.8-201ENST00000445492 379 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 snoU13.4-201ENST00000458916 104 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 KC877373.1-201ENST00000479066 408 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RNU6-496P-201ENST00000516145 99 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
BCAS3Q9H6U6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
BCAS3Q9H6U6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
BCAS3Q9H6U6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.76□□□□□ -1.81
BCAS3Q9H6U6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.76□□□□□ -1.81
BCAS3Q9H6U6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.76□□□□□ -1.81
BCAS3Q9H6U6 RNU1-70P-201ENST00000362618 164 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms