Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AP001330.5-201ENST00000607176 411 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 U6.42-201ENST00000618440 107 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC068050.1-201ENST00000394891 380 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.623-201ENST00000411128 95 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 TIMM9P3-201ENST00000428659 274 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AL627311.1-201ENST00000431514 115 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 MTND1P1-201ENST00000445453 368 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AL583843.1-201ENST00000456070 346 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC055731.1-201ENST00000474387 401 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC104136.1-201ENST00000512969 394 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.655-201ENST00000515919 96 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 MIR5692A1-201ENST00000580523 69 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC005261.5-201ENST00000596280 355 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AC087045.1-201ENST00000605856 382 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 RNU6-91P-201ENST00000607774 107 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 AL158209.2-201ENST00000619266 216 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.93□□□□□ -2.1
NXF3Q9H4D5 MIR6863-201ENST00000636112 90 ntBASIC1.93□□□□□ -2.1
NXF3Q9H4D5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 OR4G2P-201ENST00000328113 903 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.41-201ENST00000362646 102 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 SNORD3E-201ENST00000362899 217 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNA5SP240-201ENST00000365355 128 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.381-201ENST00000365666 102 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNU6-1179P-201ENST00000384667 107 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 SNORA17.3-201ENST00000391159 129 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNU6-1158P-201ENST00000391167 107 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNU6-903P-201ENST00000391270 109 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 MTCO3P40-201ENST00000392516 676 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RPL21P90-201ENST00000415692 466 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AL353621.1-201ENST00000418219 243 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC000111.3-201ENST00000433478 193 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC004383.1-201ENST00000438135 289 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 RNU7-63P-201ENST00000459054 62 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
NXF3Q9H4D5 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AP001893.2-201ENST00000526949 202 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 OR11H5P-201ENST00000554039 926 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC007375.1-201ENST00000554513 578 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC245505.1-201ENST00000556398 224 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 EIF1P4-201ENST00000572664 335 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 MTATP6P3-201ENST00000581686 676 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC008752.3-201ENST00000588113 712 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 AC139792.3-201ENST00000623525 224 ntBASIC1.92□□□□□ -2.1
NXF3Q9H4D5 SNORD14B-201ENST00000364533 90 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 RNU6-996P-201ENST00000365438 107 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 RNU6-898P-201ENST00000365627 104 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 RNU6-517P-201ENST00000384362 110 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.481-201ENST00000384373 102 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 UBE2V1P10-201ENST00000414685 269 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AL645568.3-201ENST00000433683 316 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 MTND3P21-201ENST00000433774 331 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 BTF3P15-201ENST00000455606 336 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 CYP2C59P-201ENST00000457790 269 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC068781.1-201ENST00000488231 618 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 HMGB1P30-201ENST00000492455 606 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC008526.1-201ENST00000509149 338 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 LRRC34P2-201ENST00000514850 553 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.91□□□□□ -2.1
NXF3Q9H4D5 SNORA40.12-201ENST00000516329 111 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 RNU6-720P-201ENST00000516363 108 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 OR5AQ1P-201ENST00000527596 927 ntBASIC1.91□□□□□ -2.1
NXF3Q9H4D5 AC104383.1-201ENST00000530297 370 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms