Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS11Q9H270 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS11Q9H270 RNU6-884P-201ENST00000363889 107 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 RNU6-395P-201ENST00000365662 106 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 RNU1-13P-201ENST00000384499 162 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 U3.39-201ENST00000408569 239 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 RPL26P27-201ENST00000414397 437 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AL158156.1-201ENST00000422509 473 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 HMGN2P30-201ENST00000423237 256 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 OR4C10P-201ENST00000434991 931 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AL714022.1-201ENST00000439897 151 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 RPS4XP22-201ENST00000480755 780 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS11Q9H270 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS11Q9H270 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS11Q9H270 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC093331.1-201ENST00000521474 169 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 CYCSP30-201ENST00000546447 172 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AL391261.3-201ENST00000557194 520 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS11Q9H270 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS11Q9H270 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC073657.2-201ENST00000605661 303 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
VPS11Q9H270 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
VPS11Q9H270 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS11Q9H270 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VPS11Q9H270 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS11Q9H270 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS11Q9H270 Y_RNA.33-201ENST00000362591 102 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 Y_RNA.143-201ENST00000363520 106 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 RN7SKP227-201ENST00000364445 330 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 RNA5SP283-201ENST00000365604 119 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS11Q9H270 RNU2-51P-201ENST00000410708 197 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 AC063979.1-201ENST00000415539 377 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 AL591419.1-201ENST00000427423 339 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 AC004975.1-201ENST00000428733 208 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS11Q9H270 BX679664.1-201ENST00000434429 253 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS11Q9H270 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS11Q9H270 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 AC010265.1-201ENST00000513509 211 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 SNORD116-28-201ENST00000516123 91 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS11Q9H270 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS11Q9H270 AC011921.3-201ENST00000605540 361 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS11Q9H270 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
VPS11Q9H270 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 MAPK10-322ENST00000641485 4530 ntBASIC3.6□□□□□ -1.83
VPS11Q9H270 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
VPS11Q9H270 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS11Q9H270 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS11Q9H270 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU6-858P-201ENST00000362436 107 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNY4P28-201ENST00000365281 93 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 Y_RNA.383-201ENST00000383855 97 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 Y_RNA.439-201ENST00000384119 94 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS11Q9H270 RNA5SP31-201ENST00000411144 127 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 NDUFS5P4-201ENST00000412983 318 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS11Q9H270 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS11Q9H270 AL139247.1-201ENST00000422768 325 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC007389.2-201ENST00000434630 306 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 MTATP6P7-201ENST00000453315 681 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU7-23P-201ENST00000459465 62 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC091021.1-201ENST00000468051 388 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC139453.3-201ENST00000493276 369 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU1-86P-201ENST00000516108 154 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU6-496P-201ENST00000516145 99 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU1-107P-201ENST00000516617 154 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RNU6-703P-201ENST00000516946 107 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC093023.1-201ENST00000547375 507 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AL442163.3-201ENST00000554110 156 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS11Q9H270 MIR548AC-201ENST00000585049 88 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AL078605.1-201ENST00000603529 500 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 Z83818.1-201ENST00000603584 150 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 AC012468.1-201ENST00000604888 430 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS11Q9H270 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
VPS11Q9H270 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms