Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 Y_RNA.77-201ENST00000362962 107 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 Y_RNA.553-201ENST00000384670 102 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC068050.1-201ENST00000394891 380 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC243964.1-201ENST00000441814 261 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 PSPHP1-201ENST00000450062 261 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 MTND2P33-201ENST00000506452 1031 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC008549.1-201ENST00000512900 643 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC022616.8-201ENST00000533569 253 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AGGF1P4-201ENST00000568249 801 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AL391646.1-201ENST00000603860 190 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC104073.3-201ENST00000610942 955 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.04□□□□□ -2.08
DDX47Q9H0S4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX47Q9H0S4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU6-428P-201ENST00000362942 107 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU6-336P-201ENST00000364891 107 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU6-611P-201ENST00000384276 104 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 SNORA3.2-201ENST00000408221 125 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNA5SP450-201ENST00000411206 102 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU6-293P-201ENST00000411259 106 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RN7SKP192-201ENST00000411291 327 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC013470.1-201ENST00000453438 462 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 SNRPFP3-201ENST00000457792 225 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC010424.1-201ENST00000506336 297 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC117532.1-201ENST00000514638 323 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 RNU6-965P-201ENST00000516721 96 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC109479.2-201ENST00000517842 174 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC022880.1-201ENST00000534017 973 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 MIR5583-1-201ENST00000580941 59 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC073648.5-201ENST00000603502 305 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC025811.1-201ENST00000604312 472 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC009509.4-201ENST00000619202 509 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 AC022079.1-201ENST00000621546 602 ntBASIC2.03□□□□□ -2.08
DDX47Q9H0S4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
DDX47Q9H0S4 CENPCP1-201ENST00000533085 2578 ntBASIC2.03□□□□□ -2.09
DDX47Q9H0S4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
DDX47Q9H0S4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RNU6-266P-201ENST00000364225 107 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RNU6-517P-201ENST00000384362 110 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 SNORA46.1-201ENST00000391069 153 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 MIR1262-201ENST00000408276 93 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RNU6-1245P-201ENST00000411130 106 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AL030996.1-201ENST00000411430 235 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 Z98742.3-201ENST00000418637 326 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 MTCYBP8-201ENST00000422855 651 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC073464.1-201ENST00000429823 534 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX47Q9H0S4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 TRBV12-1-201ENST00000479785 344 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AL137161.1-201ENST00000532231 390 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 HIF1AP1-201ENST00000553642 175 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 RSL24D1P11-201ENST00000591045 491 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC091805.2-201ENST00000603848 235 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC013412.1-201ENST00000610687 192 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC063943.3-201ENST00000615562 356 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 YWHAEP7-203ENST00000622054 312 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC005858.4-201ENST00000623191 700 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 AC005609.4-201ENST00000625071 447 ntBASIC2.02□□□□□ -2.09
DDX47Q9H0S4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
DDX47Q9H0S4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
DDX47Q9H0S4 RNU5A-6P-201ENST00000384136 116 ntBASIC2.01□□□□□ -2.09
DDX47Q9H0S4 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms