Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 BTF3L4P1-201ENST00000413813 468 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 PIGFP2-201ENST00000421400 651 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 BX510359.4-201ENST00000423750 193 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AL669831.1-202ENST00000428504 417 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC133104.1-201ENST00000429100 218 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AL591043.1-201ENST00000432461 424 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 HMGN2P3-201ENST00000433603 273 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 HMGN2P5-201ENST00000436882 273 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 GTF2IP13-201ENST00000438487 386 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 USP9YP29-201ENST00000445112 563 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 MTND2P33-201ENST00000506452 1031 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 PTP4A1P4-201ENST00000512479 322 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC007375.1-201ENST00000554513 578 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC008088.1-201ENST00000580993 280 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 BNIP3P25-201ENST00000596023 559 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC006566.1-201ENST00000608943 513 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AL132822.1-201ENST00000617063 513 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC099842.1-201ENST00000619919 596 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC078883.4-201ENST00000623218 367 ntBASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
POLR1EQ9GZS1 RNU6-78P-201ENST00000362897 107 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU6-527P-201ENST00000363425 104 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1303P-201ENST00000364841 107 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU6-715P-201ENST00000365204 103 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU6-456P-201ENST00000384493 107 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 SNORA8-201ENST00000384574 139 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 SRIP3-201ENST00000413200 219 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 MTCO2P34-201ENST00000421994 607 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AL358934.1-201ENST00000432346 324 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 KATNBL1P3-201ENST00000443475 909 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RPL39P29-201ENST00000447779 157 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AL353752.1-201ENST00000454946 260 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU7-182P-201ENST00000459009 62 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 RNU6-1178P-201ENST00000516674 107 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC027807.1-201ENST00000559921 996 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC078795.2-201ENST00000602835 1252 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AL590229.1-201ENST00000603497 542 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AL078605.1-201ENST00000603529 500 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 Z99497.2-201ENST00000603634 310 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AL022345.1-201ENST00000607292 135 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 AC136475.10-201ENST00000620253 385 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 SEPT14P19-203ENST00000633205 211 ntBASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
POLR1EQ9GZS1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AF228730.1-201ENST00000397972 663 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 CETN4P-201ENST00000432407 469 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AL596276.1-201ENST00000434465 418 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 FDX1P2-201ENST00000450769 375 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 MTND1P27-201ENST00000451117 902 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 snoU13.15-201ENST00000459407 104 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 RPL30P1-201ENST00000488676 339 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 MTCYBP40-201ENST00000509390 1135 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AC104136.1-201ENST00000512969 394 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 RNA5SP503-201ENST00000517047 117 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AP000873.5-201ENST00000533906 236 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 MIR4528-201ENST00000577763 90 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 CYP2C61P-201ENST00000604072 290 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 AL158063.1-201ENST00000615349 536 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.85□□□□□ -2.11
POLR1EQ9GZS1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 RNU4-48P-201ENST00000365559 182 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 SNORA11.2-201ENST00000408318 127 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 RN7SKP284-201ENST00000411002 343 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 MTCO2P11-201ENST00000431069 680 ntBASIC1.84□□□□□ -2.11
POLR1EQ9GZS1 MTND4P32-201ENST00000437189 1237 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms