Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 U3.39-201ENST00000408569 239 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 RNU6-1245P-201ENST00000411130 106 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 LINC01399-202ENST00000458450 244 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 snoU13.28-201ENST00000459235 104 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC025518.1-201ENST00000479856 347 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 RNU6-570P-201ENST00000517051 105 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AP003733.2-201ENST00000529409 171 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC104581.2-201ENST00000572227 430 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 MIR3128-201ENST00000581957 66 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC060766.3-201ENST00000591442 263 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC096772.1-201ENST00000609146 564 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 AC097372.5-201ENST00000623665 376 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 U6.104-201ENST00000637979 90 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NDC1Q9BTX1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NDC1Q9BTX1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.14-201ENST00000362415 103 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.27-201ENST00000362540 103 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.183-201ENST00000363882 113 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 RNU6-1280P-201ENST00000365211 107 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.552-201ENST00000384665 112 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 RNU6-121P-201ENST00000410525 99 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AP000275.1-201ENST00000411943 390 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 BPY2DP-201ENST00000422208 265 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 RPL23AP22-201ENST00000437556 453 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 RNU7-87P-201ENST00000459343 62 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 MTND1P19-201ENST00000511780 315 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 RNU7-175P-201ENST00000515915 61 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 MIR4425-201ENST00000580572 84 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AC243829.7-201ENST00000633081 225 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 ADAM3A-203ENST00000461344 2157 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AC009541.1-201ENST00000438279 2662 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NDC1Q9BTX1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.33□□□□□ -1.88
NDC1Q9BTX1 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RNU4-35P-201ENST00000362588 141 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 U3.13-201ENST00000364804 214 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 SNORD116-20-201ENST00000384529 92 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 MIR490-201ENST00000384865 128 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL21P75-201ENST00000396599 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL21P28-201ENST00000401418 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL21P38-201ENST00000418090 167 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AL590556.1-201ENST00000423231 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AL513124.1-201ENST00000450410 614 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL21P39-201ENST00000463605 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RN7SL594P-201ENST00000470590 287 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC087190.1-201ENST00000484462 480 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC107032.1-201ENST00000485945 480 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC132942.1-201ENST00000486753 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC093591.1-201ENST00000491435 481 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL21P16-201ENST00000495531 483 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC010469.2-201ENST00000496412 480 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 Y_RNA.706-201ENST00000516933 99 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC091144.1-201ENST00000519573 138 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 CR383656.8-201ENST00000549046 145 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AL442163.3-201ENST00000554110 156 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC021739.1-201ENST00000559631 174 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 MIR4644-201ENST00000579929 84 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 RPL23AP78-201ENST00000599928 470 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AC241585.2-209ENST00000638217 143 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.32□□□□□ -1.88
NDC1Q9BTX1 MTND5P6-201ENST00000422338 1798 ntBASIC3.32□□□□□ -1.88
NDC1Q9BTX1 AL049781.1-201ENST00000623195 3585 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms