Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC008669.1-201ENST00000565823 2178 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RNU6-874P-201ENST00000362390 105 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.106-201ENST00000363189 100 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.210-201ENST00000364161 110 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC096649.2-201ENST00000416186 393 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RPS15AP5-201ENST00000436276 388 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RPL21P2-201ENST00000440049 481 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 DYNLT3P2-201ENST00000442517 295 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 snoU109.2-201ENST00000459316 135 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RPL23AP45-201ENST00000476406 468 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC068781.1-201ENST00000488231 618 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RPL7P47-201ENST00000497299 556 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 RNU6-377P-201ENST00000515965 102 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC022616.4-201ENST00000522985 181 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 ELOCP29-201ENST00000588193 334 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC024153.1-201ENST00000603103 365 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AL365434.2-201ENST00000607979 234 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 MIR8062-201ENST00000621515 85 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 AC018555.1-201ENST00000567548 1980 ntBASIC3.47□□□□□ -1.85
LRFN3Q9BTN0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 RNU1-18P-201ENST00000363062 164 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.151-201ENST00000363566 112 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.152-201ENST00000363578 100 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 RNA5SP139-201ENST00000364340 117 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 MIR548I3-201ENST00000408378 149 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 MIR548I1-201ENST00000408810 149 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 ARL5AP4-201ENST00000430731 512 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC011816.1-201ENST00000441346 546 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC012308.1-201ENST00000451232 178 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AL441985.1-201ENST00000457727 251 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 RNU7-187P-201ENST00000458985 68 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC114801.2-201ENST00000503825 781 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 HSBP1P1-201ENST00000555205 166 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 SUB1P3-201ENST00000564581 315 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC025281.1-201ENST00000567026 265 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 MIR4319-201ENST00000577285 85 ntBASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRFN3Q9BTN0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 MIR1252-201ENST00000408861 65 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 RNA5SP184-201ENST00000411071 108 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL356968.1-201ENST00000416622 474 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL031274.1-201ENST00000450334 232 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 RNU2-53P-201ENST00000516257 147 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC006199.1-201ENST00000548728 219 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 Z98751.3-201ENST00000604447 521 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL162713.1-201ENST00000604480 262 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 ELOCP5-201ENST00000604924 333 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC123912.5-201ENST00000605470 343 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AC138627.2-201ENST00000624202 601 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL773545.4-201ENST00000637262 310 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 U4.7-201ENST00000638126 106 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 AL513478.4-201ENST00000641636 310 ntBASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LRFN3Q9BTN0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.288-201ENST00000364854 92 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 RNU6-472P-201ENST00000384299 107 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 Y_RNA.552-201ENST00000384665 112 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 MIR517A-201ENST00000385001 87 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 RNU1-101P-201ENST00000391171 127 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 RPL21P1-201ENST00000399532 476 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 CHEK2P4-201ENST00000450340 246 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 AC105758.1-201ENST00000506038 399 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 AC109446.1-201ENST00000566172 220 ntBASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.44□□□□□ -1.86
LRFN3Q9BTN0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms