Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC018889.1-201ENST00000605372 397 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC022893.3-201ENST00000607665 437 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AL355816.2-201ENST00000610049 647 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 AC068880.4-201ENST00000623082 495 ntBASIC0.46□□□□□ -2.34
LIMD2Q9BT23 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.46□□□□□ -2.34
LIMD2Q9BT23 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 RNU6-212P-201ENST00000362642 104 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 SNORD3E-201ENST00000362899 217 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 RNU6-53P-201ENST00000365367 106 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 SNORD116-20-201ENST00000384529 92 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 MTCO1P21-201ENST00000416634 589 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AL591212.2-201ENST00000433923 257 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 MTND5P15-201ENST00000434246 349 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC099677.2-201ENST00000436385 175 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 HSPE1P13-201ENST00000451143 297 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 SUMO2P5-201ENST00000506790 245 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC005741.1-201ENST00000511094 432 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 RNU5A-4P-201ENST00000516588 111 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 RN7SKP88-201ENST00000516847 250 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AL136520.1-202ENST00000555494 763 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 HMGB1P33-201ENST00000563485 527 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 AC090578.1-201ENST00000604955 591 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 7SK.8-201ENST00000612110 250 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 7SK.11-201ENST00000615477 250 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.45□□□□□ -2.34
LIMD2Q9BT23 7SK.13-201ENST00000622040 250 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 SCARNA4-202ENST00000625402 129 ntBASIC0.45□□□□□ -2.34
LIMD2Q9BT23 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 OR4G2P-201ENST00000328113 903 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 MIR608-201ENST00000384820 100 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 FCF1P10-201ENST00000407590 479 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 MIR1284-201ENST00000408337 120 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC114482.1-201ENST00000418010 247 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL590556.1-201ENST00000423231 483 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 TXNL1P1-201ENST00000429528 554 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 EEF1E1P1-201ENST00000446998 430 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL139824.2-201ENST00000458731 1095 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC005840.1-201ENST00000498412 377 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 SNORA43.2-201ENST00000516652 128 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 RNU6-677P-201ENST00000516914 101 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 RNA5SP503-201ENST00000517047 117 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 SUMO2P18-201ENST00000518873 252 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC091135.1-201ENST00000585943 307 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AP001542.1-201ENST00000591314 200 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL590095.2-201ENST00000604136 117 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC069114.2-201ENST00000604699 304 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC105129.3-201ENST00000605455 485 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 RNU6-87P-201ENST00000607561 108 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AC012467.1-201ENST00000607740 256 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.44□□□□□ -2.34
LIMD2Q9BT23 AL133216.2-202ENST00000634512 349 ntBASIC0.44□□□□□ -2.34
LIMD2Q9BT23 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 USP9YP21-201ENST00000420603 432 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 RPL17P35-201ENST00000432217 549 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 MTND2P33-201ENST00000506452 1031 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 MIR15A-201ENST00000607334 83 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 AL365434.2-201ENST00000607979 234 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 RMST_4.1-201ENST00000616886 107 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 AC104985.3-201ENST00000623479 597 ntBASIC0.43□□□□□ -2.34
LIMD2Q9BT23 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.43□□□□□ -2.34
LIMD2Q9BT23 SNORD114-24-201ENST00000365029 72 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 SMIM11P1-201ENST00000369586 178 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 SNORA40.2-201ENST00000390847 128 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 SNORD12-201ENST00000391002 90 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 RNU2-7P-201ENST00000410794 178 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 USP9YP11-201ENST00000427537 717 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AC069257.2-201ENST00000441819 155 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 RNU6-197P-201ENST00000516680 100 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 RNU6-334P-201ENST00000517072 102 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 SNORA70.22-201ENST00000517160 124 ntBASIC0.42□□□□□ -2.34
LIMD2Q9BT23 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.42□□□□□ -2.34
LIMD2Q9BT23 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms