Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 KATNBL1P3-201ENST00000443475 909 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC012308.1-201ENST00000451232 178 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AL137159.1-201ENST00000452808 512 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-956P-201ENST00000458868 103 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC116562.3-201ENST00000506136 177 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC010424.1-201ENST00000506336 297 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RBBP4P6-201ENST00000508098 202 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-123P-201ENST00000516163 102 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU2-53P-201ENST00000516257 147 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-445P-201ENST00000516949 107 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RNU6-430P-201ENST00000517078 107 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC068587.5-201ENST00000528506 175 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC137800.2-201ENST00000574375 120 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 MIR4775-201ENST00000581168 75 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC040904.1-201ENST00000590850 223 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 RSL24D1P11-201ENST00000591045 491 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AL138889.2-201ENST00000603883 242 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC005034.5-201ENST00000604219 466 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC126118.1-201ENST00000607744 628 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AC136475.10-201ENST00000620253 385 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 AL160394.1-201ENST00000624765 724 ntBASIC1.66□□□□□ -2.14
FOXC2Q99958 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
FOXC2Q99958 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FOXC2Q99958 KPNA2P1-201ENST00000458289 1591 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 SNORD115-7-201ENST00000365306 82 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
FOXC2Q99958 RNU6-1103P-201ENST00000384150 107 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 DEFB108C-201ENST00000400154 252 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 CALM2P2-201ENST00000428512 440 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC133104.1-201ENST00000429100 218 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 MTCO2P11-201ENST00000431069 680 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 GPR143P-201ENST00000434155 205 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 MTATP6P26-201ENST00000445926 662 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC079781.2-201ENST00000446424 169 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 TPT1P7-201ENST00000458300 517 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 RNU6-717P-201ENST00000459076 104 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 HMGB1P30-201ENST00000492455 606 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC093534.1-201ENST00000504977 132 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FOXC2Q99958 AC091133.4-201ENST00000511142 308 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXC2Q99958 AP004607.1-201ENST00000524456 203 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AP002453.2-201ENST00000533503 320 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.65□□□□□ -2.15
FOXC2Q99958 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXC2Q99958 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXC2Q99958 AC098848.2-201ENST00000588023 330 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 BNIP3P30-201ENST00000601184 574 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.65□□□□□ -2.15
FOXC2Q99958 U6.42-201ENST00000618440 107 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AC011155.2-201ENST00000623202 216 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AL157786.1-207ENST00000627771 695 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.65□□□□□ -2.15
FOXC2Q99958 AC090582.1-201ENST00000636321 199 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 AP000553.5-201ENST00000641933 54 ntBASIC1.65□□□□□ -2.15
FOXC2Q99958 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
FOXC2Q99958 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
FOXC2Q99958 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
FOXC2Q99958 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU6-529P-201ENST00000363383 104 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 Y_RNA.159-201ENST00000363674 87 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 Y_RNA.201-201ENST00000364052 96 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU6-622P-201ENST00000384272 103 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 Y_RNA.576-201ENST00000384781 102 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 MIR578-201ENST00000384828 96 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 MIR454-201ENST00000390180 115 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU2-40P-201ENST00000410833 196 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU6-387P-201ENST00000411331 105 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 HMGB3P2-201ENST00000411913 584 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 UBE2V1P10-201ENST00000414685 269 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.64□□□□□ -2.15
FOXC2Q99958 MTCO2P34-201ENST00000421994 607 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 HMGN2P38-201ENST00000423806 265 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 MTND4P32-201ENST00000437189 1237 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AL360271.2-201ENST00000447710 161 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 MTND1P27-201ENST00000451117 902 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 C1DP4-201ENST00000455429 424 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 snoU109.2-201ENST00000459316 135 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AC112206.3-201ENST00000514578 389 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNA5SP364-201ENST00000516938 78 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNU6-410P-201ENST00000517006 107 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RNA5SP490-201ENST00000517141 136 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 ADI1P3-201ENST00000549509 470 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.64□□□□□ -2.15
FOXC2Q99958 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.64□□□□□ -2.15
FOXC2Q99958 AC006362.1-201ENST00000567392 174 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 RN7SKP299-201ENST00000606679 301 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 MIR98-201ENST00000606724 119 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms