Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RNU6-416P-201ENST00000516265 103 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 ACA59.2-201ENST00000517061 156 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA3Q99758 MTCO2P15-201ENST00000532655 656 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA3Q99758 AC093249.1-201ENST00000567049 203 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
ABCA3Q99758 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
ABCA3Q99758 AC068205.3-201ENST00000636385 468 ntBASIC0.15□□□□□ -2.39
ABCA3Q99758 RNU6-754P-201ENST00000391166 107 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 RPL36AP53-201ENST00000432891 316 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 MTCO3P18-201ENST00000440206 761 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC113410.1-201ENST00000505029 247 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC116655.1-201ENST00000508324 901 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.14□□□□□ -2.39
ABCA3Q99758 MTCO3P7-201ENST00000510008 774 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC010587.2-201ENST00000511727 448 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 RNU2-53P-201ENST00000516257 147 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 RN7SKP256-201ENST00000517201 314 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.14□□□□□ -2.39
ABCA3Q99758 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.14□□□□□ -2.39
ABCA3Q99758 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
ABCA3Q99758 AC005951.2-201ENST00000576282 495 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 AC107952.2-201ENST00000606048 486 ntBASIC0.14□□□□□ -2.39
ABCA3Q99758 RNU6-944P-201ENST00000364023 107 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC138623.1-201ENST00000418060 216 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AL121578.1-201ENST00000428051 892 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC012308.1-201ENST00000451232 178 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 CECR9-201ENST00000453421 199 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC090502.2-201ENST00000549267 280 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC091489.2-201ENST00000566263 604 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 MIR4723-201ENST00000585070 81 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.13□□□□□ -2.39
ABCA3Q99758 AL118556.2-201ENST00000614375 824 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC023934.1-201ENST00000574529 2389 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 RNU6-296P-201ENST00000384608 107 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 MIR520A-201ENST00000384862 85 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 CETN4P-201ENST00000432407 469 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.13□□□□□ -2.39
ABCA3Q99758 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.13□□□□□ -2.39
ABCA3Q99758 SNORA3.4-201ENST00000515969 96 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 HMGB1P33-201ENST00000563485 527 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.13□□□□□ -2.39
ABCA3Q99758 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.13□□□□□ -2.39
ABCA3Q99758 PCMTD1P7-201ENST00000634506 357 ntBASIC0.13□□□□□ -2.39
ABCA3Q99758 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA3Q99758 RNA5SP266-201ENST00000410273 108 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA3Q99758 MTND2P21-201ENST00000436242 1042 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 AC130509.1-201ENST00000464158 433 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA3Q99758 AC025423.5-201ENST00000550230 219 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 AC004853.1-201ENST00000604902 698 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 AL603758.1-201ENST00000618654 241 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 AC009269.6-201ENST00000621778 588 ntBASIC0.12□□□□□ -2.39
ABCA3Q99758 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.12□□□□□ -2.39
ABCA3Q99758 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.11□□□□□ -2.39
ABCA3Q99758 MIR411-201ENST00000362239 96 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 Y_RNA.552-201ENST00000384665 112 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 MTND2P4-201ENST00000445034 1004 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 AC092001.1-201ENST00000453012 261 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.11□□□□□ -2.39
ABCA3Q99758 EIF1P4-201ENST00000572664 335 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 VN1R83P-201ENST00000595685 445 ntBASIC0.11□□□□□ -2.39
ABCA3Q99758 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.11□□□□□ -2.39
ABCA3Q99758 RNU6-23P-201ENST00000363283 107 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RNU6-39P-201ENST00000384344 107 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
ABCA3Q99758 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA3Q99758 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC013828.1-201ENST00000481845 158 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AP003392.2-201ENST00000527269 208 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
ABCA3Q99758 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AL133475.1-201ENST00000404414 305 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA3Q99758 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.1□□□□□ -2.39
ABCA3Q99758 RPL37P21-201ENST00000435890 276 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RPEP5-201ENST00000441137 268 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RPS29P8-201ENST00000445109 171 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AL606662.1-201ENST00000445763 553 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AL050341.1-201ENST00000447743 313 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 MTND1P3-201ENST00000484956 952 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 MTCO1P31-201ENST00000506355 492 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AC010460.2-201ENST00000509054 677 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC018630.3-201ENST00000542637 96 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.1□□□□□ -2.39
ABCA3Q99758 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.1□□□□□ -2.39
ABCA3Q99758 AC093519.1-201ENST00000566109 298 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 BNIP3P31-201ENST00000604515 566 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RNU6-87P-201ENST00000607561 108 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 AP001596.2-201ENST00000608410 312 ntBASIC0.1□□□□□ -2.39
ABCA3Q99758 RMST_4.1-201ENST00000616886 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms