Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 AP003716.2-201ENST00000528260 108 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AP002826.1-201ENST00000608835 315 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 SNORD114-24-201ENST00000365029 72 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 MIR124-2-201ENST00000385081 109 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC138623.1-201ENST00000418060 216 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 RPS15AP9-201ENST00000439856 381 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 BPTFP1-201ENST00000579209 492 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 MIR4499-201ENST00000584834 69 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC009233.1-201ENST00000616477 371 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 RNU6-251P-201ENST00000363235 104 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 RNA5SP501-201ENST00000410990 112 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC078974.1-201ENST00000411597 223 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 NANOGP2-201ENST00000435391 727 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC016925.1-201ENST00000458303 298 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
COL12A1Q99715 RNU6-983P-201ENST00000516004 103 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 LRRC34P1-201ENST00000542742 915 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC105148.1-201ENST00000604961 409 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC105129.3-201ENST00000605455 485 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC016909.1-201ENST00000415916 166 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 MTCO3P5-201ENST00000433620 714 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC105185.1-201ENST00000518705 535 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AL355073.2-201ENST00000612106 557 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC092447.10-201ENST00000620607 1652 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 AC068057.2-201ENST00000624047 895 ntBASIC-0.21□□□□□ -2.44
COL12A1Q99715 RNA5SP264-201ENST00000363115 107 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 SNORD14C-201ENST00000365382 88 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 RNU6-532P-201ENST00000384318 107 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 MIR29B2-201ENST00000385055 81 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AL589872.1-201ENST00000426602 288 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL12A1Q99715 AP002004.2-201ENST00000531656 154 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 CYB5AP5-201ENST00000549779 389 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC027104.1-201ENST00000563702 681 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC092447.9-201ENST00000603395 144 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AL356157.2-201ENST00000605122 111 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC069294.1-201ENST00000608397 350 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AL589743.7-201ENST00000612637 233 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 MIR643-201ENST00000385267 97 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.22□□□□□ -2.44
COL12A1Q99715 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC022523.2-201ENST00000561045 150 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC012507.3-201ENST00000603556 477 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 AC096586.2-201ENST00000610260 441 ntBASIC-0.22□□□□□ -2.44
COL12A1Q99715 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.22□□□□□ -2.45
COL12A1Q99715 RNU6-877P-201ENST00000383868 107 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 MIR1283-2-201ENST00000408621 87 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 MTND4LP21-201ENST00000415303 295 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.22□□□□□ -2.45
COL12A1Q99715 RPS3AP17-201ENST00000472594 777 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 AC091959.1-201ENST00000495857 238 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.22□□□□□ -2.45
COL12A1Q99715 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL12A1Q99715 AC022616.8-201ENST00000533569 253 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 AC112220.3-201ENST00000605502 502 ntBASIC-0.22□□□□□ -2.45
COL12A1Q99715 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 RNU2-49P-201ENST00000410666 184 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AL160275.3-201ENST00000423876 471 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
COL12A1Q99715 SNORD4A-201ENST00000459174 72 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 TRBV8-1-201ENST00000481590 279 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 HMGN1P12-201ENST00000499125 195 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC091885.1-201ENST00000506658 268 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC026782.1-201ENST00000512952 449 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 SNORA70.16-201ENST00000516390 95 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 TMF1P1-201ENST00000576058 373 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC138749.5-201ENST00000611461 208 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC-0.23□□□□□ -2.45
COL12A1Q99715 AL109659.3-201ENST00000624985 950 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 RNY1P7-201ENST00000384743 110 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms