Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 RPL21P10-201ENST00000463521 490 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 SNORA70.19-201ENST00000516717 90 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 AC026333.2-201ENST00000542164 106 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 SRGNP1-201ENST00000603392 451 ntBASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP1Q96SZ6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 U3.19-201ENST00000390893 196 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR190B-201ENST00000401119 79 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 MTCYBP2-201ENST00000407745 171 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 Y_RNA.626-201ENST00000411288 95 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 AC079780.1-201ENST00000428259 207 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 HMGB1P27-201ENST00000431429 603 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 AL445305.1-201ENST00000432577 575 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 HSPE1P25-201ENST00000455484 251 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 RNU6-1037P-201ENST00000459571 107 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 RN7SL601P-201ENST00000471221 293 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 MIR892C-201ENST00000516410 77 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 AP006245.1-201ENST00000522549 120 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 AC010186.2-204ENST00000537668 439 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 AL590240.4-201ENST00000616908 390 ntBASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP1Q96SZ6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDK5RAP1Q96SZ6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
CDK5RAP1Q96SZ6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-222P-201ENST00000362438 107 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-428P-201ENST00000362942 107 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-704P-201ENST00000364162 103 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.286-201ENST00000364813 102 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 SNORA12.2-201ENST00000391040 156 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-837P-201ENST00000391056 108 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 SNORD56-201ENST00000413522 71 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AL158156.1-201ENST00000422509 473 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 Z82188.1-201ENST00000436709 154 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 TOMM22P6-201ENST00000465035 409 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AC109925.1-201ENST00000478069 331 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AC093663.1-201ENST00000497190 394 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-496P-201ENST00000516145 99 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AP004371.1-201ENST00000525240 214 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AL590705.4-201ENST00000532209 134 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AC240442.1-201ENST00000616055 283 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 RMST_4.1-201ENST00000616886 107 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 AL360181.4-201ENST00000621752 134 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDK5RAP1Q96SZ6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-740P-201ENST00000364734 105 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 Y_RNA.383-201ENST00000383855 97 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-76P-201ENST00000384060 104 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU6-926P-201ENST00000384075 107 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 MIR490-201ENST00000384865 128 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 HMGN2P20-201ENST00000437531 273 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RPL26P6-201ENST00000440913 438 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RPL30P10-201ENST00000488148 337 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 APOOP4-201ENST00000513530 597 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RNU7-200P-201ENST00000516105 62 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 RNY3P16-201ENST00000516338 101 ntBASIC3.57□□□□□ -1.84
CDK5RAP1Q96SZ6 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms