Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 S100A11P1-201ENST00000477525 312 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPS3AP50-201ENST00000487064 803 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPS27AP18-201ENST00000515536 459 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 SCARNA24.1-201ENST00000516465 137 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 SNORA25.14-201ENST00000516481 132 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC091144.1-201ENST00000519573 138 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 OR1M4P-201ENST00000589199 287 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC020895.1-201ENST00000595362 272 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC005005.4-201ENST00000623789 16698 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AP002512.4-202ENST00000641599 4530 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.256-201ENST00000364594 104 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU1-39P-201ENST00000383897 165 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNA5SP266-201ENST00000410273 108 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 BTF3L4P1-201ENST00000413813 468 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPL29P14-201ENST00000495837 428 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNA5SP497-201ENST00000516081 97 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC022254.1-201ENST00000567857 235 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 HMGB1P50-201ENST00000605814 607 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC022509.4-201ENST00000621404 572 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU5F-1-201ENST00000362507 117 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNA5SP97-201ENST00000365006 84 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-1130P-201ENST00000365434 107 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-756P-201ENST00000383997 107 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.573-201ENST00000384763 105 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 SNORD17-201ENST00000390930 237 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-700P-201ENST00000391043 107 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-1109P-201ENST00000391187 107 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MCTS2P-201ENST00000394552 546 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL158823.1-201ENST00000418441 478 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL358934.1-201ENST00000432346 324 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPL5P30-201ENST00000465511 891 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNF138P1-201ENST00000502765 546 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNA5SP341-201ENST00000516261 117 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 CYB5AP5-201ENST00000549779 389 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC104581.2-201ENST00000572227 430 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC004832.5-201ENST00000608677 401 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 5S_rRNA.16-201ENST00000612928 119 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 IGLL4P-201ENST00000614590 133 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MIR376A1-201ENST00000616574 68 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 Z99571.1-201ENST00000636677 394 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU4-21P-201ENST00000362802 126 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU1-91P-201ENST00000364746 163 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 WARS2P1-201ENST00000429678 537 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MTCYBP45-201ENST00000435243 565 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RPS4XP22-201ENST00000480755 780 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 HMGB3P15-201ENST00000507326 574 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC093331.1-201ENST00000521474 169 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 IGHV3-76-201ENST00000522465 295 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 OR6R2P-201ENST00000609216 300 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 MIR6507-201ENST00000613630 70 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AC005296.1-201ENST00000616145 209 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 U6.106-201ENST00000636360 105 ntBASIC1.17□□□□□ -2.22
HMCN1Q96RW7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HMCN1Q96RW7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms