Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
IFT43Q96FT9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
IFT43Q96FT9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.37□□□□□ -1.71
IFT43Q96FT9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
IFT43Q96FT9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
IFT43Q96FT9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 Z82217.1-201ENST00000625157 8149 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 RNA5SP322-201ENST00000363617 119 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 RNU6-270P-201ENST00000364131 105 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 RNU6-312P-201ENST00000364629 107 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 Y_RNA.498-201ENST00000384460 102 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
IFT43Q96FT9 HSPE1P12-201ENST00000412576 301 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC099548.1-201ENST00000421443 426 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC019205.3-201ENST00000424573 156 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 ABCF2P2-201ENST00000450549 296 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 CYCSP29-201ENST00000533731 318 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC011602.1-201ENST00000546484 331 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 AC020914.4-201ENST00000597690 277 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 snoU18.1-201ENST00000629629 71 ntBASIC4.36□□□□□ -1.71
IFT43Q96FT9 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
IFT43Q96FT9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNU1-132P-201ENST00000364300 164 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNA5SP479-201ENST00000364858 117 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNU6-1130P-201ENST00000365434 107 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNU6-449P-201ENST00000383914 107 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 Y_RNA.400-201ENST00000383963 111 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNU6-622P-201ENST00000384272 103 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 Y_RNA.571-201ENST00000384753 98 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 SNORD66.1-201ENST00000391230 76 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 YPEL5P1-201ENST00000419731 367 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 HMGB1P37-201ENST00000439613 609 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC007215.1-201ENST00000464893 276 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC146944.2-203ENST00000502493 354 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AL592156.1-201ENST00000508758 304 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC139495.1-202ENST00000513164 354 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 RNU6-191P-201ENST00000516295 94 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 SNORA31.9-201ENST00000516429 84 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 MIR2114-201ENST00000516645 80 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 ACA59.2-201ENST00000517061 156 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.35□□□□□ -1.71
IFT43Q96FT9 ARF4P1-201ENST00000605447 541 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC084757.4-201ENST00000616350 526 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 AC091895.1-201ENST00000624494 256 ntBASIC4.35□□□□□ -1.71
IFT43Q96FT9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
IFT43Q96FT9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
IFT43Q96FT9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
IFT43Q96FT9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
IFT43Q96FT9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
IFT43Q96FT9 RNU6-793P-201ENST00000384233 104 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 Y_RNA.488-201ENST00000384403 102 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 RNU6-1154P-201ENST00000391001 104 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 RNU6-1248P-201ENST00000391096 64 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC140059.1-201ENST00000489238 361 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC115990.1-201ENST00000526957 301 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC006064.5-201ENST00000541782 248 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC006199.1-201ENST00000548728 219 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC004467.1-201ENST00000615678 330 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC004825.2-201ENST00000616634 455 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 MIR8059-201ENST00000620427 81 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC092593.1-201ENST00000515413 1815 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 AC099654.7-201ENST00000635788 2127 ntBASIC4.34□□□□□ -1.71
IFT43Q96FT9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
IFT43Q96FT9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
IFT43Q96FT9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms