Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AC078809.1-201ENST00000427601 140 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 MTND3P21-201ENST00000433774 331 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AC244670.1-201ENST00000436879 112 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 MTCO2P3-201ENST00000442543 421 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AL137159.1-201ENST00000452808 512 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AC019235.1-201ENST00000503847 207 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AC009646.1-201ENST00000510455 318 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AL512360.1-201ENST00000555346 234 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 RPS3AP23-202ENST00000574601 686 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AC092747.3-201ENST00000603769 301 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 AL132822.1-201ENST00000617063 513 ntBASIC2.3□□□□□ -2.04
VPS33AQ96AX1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS33AQ96AX1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS33AQ96AX1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS33AQ96AX1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 RNU6-623P-201ENST00000363143 105 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 RNU6-142P-201ENST00000384019 107 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 MIR514A2-201ENST00000385131 88 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 MIR514A3-201ENST00000385132 88 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 HMGN2P39-201ENST00000398005 273 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 RPL23AP95-201ENST00000426806 265 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SEPT14P3-201ENST00000439401 183 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AL732372.2-207ENST00000445840 183 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AL031659.1-201ENST00000447075 539 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SEPT14P2-201ENST00000453405 183 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC107032.1-201ENST00000485945 480 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SEPT14P4-201ENST00000513445 186 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SNORA70.24-201ENST00000517233 118 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC087854.1-201ENST00000519706 414 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC107953.1-201ENST00000522216 297 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 FO082796.1-201ENST00000523795 183 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC078814.3-201ENST00000553036 491 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 GTF3AP2-201ENST00000557014 266 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 ELOCP29-201ENST00000588193 334 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 AC087241.4-201ENST00000612441 480 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SNORD98-201ENST00000636377 67 ntBASIC2.29□□□□□ -2.04
VPS33AQ96AX1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS33AQ96AX1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC092268.1-201ENST00000342691 405 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 RNU4-20P-201ENST00000365601 151 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 SNORA26.3-201ENST00000391119 136 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 SNORA11-201ENST00000408789 128 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 Y_RNA.597-201ENST00000410463 100 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AL133396.1-201ENST00000432048 687 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 IFNA20P-201ENST00000436840 528 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 SNORD60.2-201ENST00000516883 86 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AL118558.2-201ENST00000556294 238 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 HMGB1P33-201ENST00000563485 527 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AP001836.1-201ENST00000604675 523 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 AC092608.2-201ENST00000624427 218 ntBASIC2.28□□□□□ -2.04
VPS33AQ96AX1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.28□□□□□ -2.04
VPS33AQ96AX1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
VPS33AQ96AX1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 RNU4-56P-201ENST00000364700 142 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 MTCO3P41-201ENST00000414801 328 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 AC025750.2-201ENST00000442609 450 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 MTCO2P7-201ENST00000446518 666 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS33AQ96AX1 MTND3P16-201ENST00000452205 344 ntBASIC2.27□□□□□ -2.05
VPS33AQ96AX1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms