Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 AL161423.1-201ENST00000613700 262 ntBASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CKAP2Q8WWK9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CKAP2Q8WWK9 Y_RNA.41-201ENST00000362646 102 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNU6-336P-201ENST00000364891 107 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNU6-827P-201ENST00000365553 106 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNU6-780P-201ENST00000391030 104 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC009238.1-201ENST00000442165 424 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 MTND1P1-201ENST00000445453 368 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 MTCO2P7-201ENST00000446518 666 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC009237.6-201ENST00000446969 424 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 PSPHP1-201ENST00000450062 261 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AL021397.1-201ENST00000451806 248 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 TPTE2P5-203ENST00000458118 728 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC090115.3-201ENST00000553218 849 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AL512360.1-201ENST00000555346 234 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC027807.1-201ENST00000559921 996 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 VN1R80P-201ENST00000597126 338 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
CKAP2Q8WWK9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 MTND4P1-201ENST00000457501 1466 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 CBX3P9-201ENST00000402326 552 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 SNORA11.2-201ENST00000408318 127 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AL589823.1-201ENST00000429577 183 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC243964.1-201ENST00000441814 261 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 snoU13.14-201ENST00000459372 104 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AK3P2-201ENST00000507976 429 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 Y_RNA.693-201ENST00000516641 110 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC118273.2-201ENST00000532092 465 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC021269.2-201ENST00000532318 330 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC103996.1-201ENST00000555468 102 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC091135.1-201ENST00000585943 307 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 AL159153.1-201ENST00000619688 317 ntBASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.2□□□□□ -2.06
CKAP2Q8WWK9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 Y_RNA.372-201ENST00000365599 102 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RNU6-38P-201ENST00000384085 107 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RNU6-692P-201ENST00000384496 107 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 MIR561-201ENST00000385216 97 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AL353752.1-201ENST00000454946 260 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RPS3P1-201ENST00000456781 192 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RNU6-333P-201ENST00000459117 107 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RPL30P1-201ENST00000488676 339 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC019235.1-201ENST00000503847 207 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC010486.1-201ENST00000511793 424 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 CYCSP27-201ENST00000527643 293 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 CYCSP26-201ENST00000534107 320 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 OR11H5P-201ENST00000554039 926 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AL118558.2-201ENST00000556294 238 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC092747.3-201ENST00000603769 301 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC015540.1-201ENST00000615828 501 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AC241585.2-209ENST00000638217 143 ntBASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CKAP2Q8WWK9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 RNU4-82P-201ENST00000362443 140 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 U3.12-201ENST00000364498 214 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 Y_RNA.378-201ENST00000365652 113 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
CKAP2Q8WWK9 AL117339.3-201ENST00000418733 162 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms