Protein–RNA interactions for Protein: Q8TEQ0

SNX29, Sorting nexin-29, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29Q8TEQ0 CYCSP30-201ENST00000546447 172 ntBASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 AC021739.1-201ENST00000559631 174 ntBASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 AL137849.1-201ENST00000604767 169 ntBASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 AC006001.4-201ENST00000622243 395 ntBASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SNX29Q8TEQ0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SNX29Q8TEQ0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
SNX29Q8TEQ0 AC110491.1-201ENST00000562191 2010 ntBASIC4.28□□□□□ -1.73
SNX29Q8TEQ0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNU6-1020P-201ENST00000363684 107 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNU6-270P-201ENST00000364131 105 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.331-201ENST00000365267 102 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNY4P28-201ENST00000365281 93 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.418-201ENST00000384029 102 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNU6-493P-201ENST00000391321 108 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 BPY2DP-201ENST00000422208 265 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC005300.1-201ENST00000428401 373 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 SETP5-201ENST00000437270 562 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 POLR2KP2-201ENST00000438155 177 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 SNORA71B-202ENST00000439232 272 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RPL39P29-201ENST00000447779 157 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RPL23AP3-201ENST00000453844 468 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNA5SP310-201ENST00000459084 116 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RPL30P12-201ENST00000474666 353 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC091959.1-201ENST00000495857 238 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC006445.2-201ENST00000510061 472 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RNU6-255P-201ENST00000516957 105 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC006199.1-201ENST00000548728 219 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC087499.8-201ENST00000578406 226 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 MIR3133-201ENST00000583157 78 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC005176.2-201ENST00000596933 147 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC010620.2-201ENST00000600135 313 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 AL672296.1-201ENST00000427780 2158 ntBASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.27□□□□□ -1.73
SNX29Q8TEQ0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 MAPK10-373ENST00000641983 6772 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 MIR410-201ENST00000362222 80 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.122-201ENST00000363331 96 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 RNU6-187P-201ENST00000384139 106 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 SNORA3.3-201ENST00000408712 125 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 RNU6-651P-201ENST00000411040 105 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 MRPS10P1-201ENST00000448483 130 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AP000705.1-201ENST00000454567 350 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 RNA5SP164-201ENST00000516533 110 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 ACA59.2-201ENST00000517061 156 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AC090897.2-201ENST00000581715 130 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 AC008749.1-201ENST00000597650 306 ntBASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SNX29Q8TEQ0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 CUL1P1-201ENST00000509510 2425 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 RNU6-682P-201ENST00000363843 106 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.446-201ENST00000384178 104 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 SNORA46.1-201ENST00000391069 153 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 SNORA57.1-201ENST00000391227 145 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 Y_RNA.595-201ENST00000410403 105 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 AC010095.1-201ENST00000443543 144 ntBASIC4.25□□□□□ -1.73
SNX29Q8TEQ0 RNU6-861P-201ENST00000516745 106 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms