Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNORA3.3-201ENST00000408712 125 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 BTF3P11-201ENST00000426582 477 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC079780.1-201ENST00000428259 207 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 YME1L1P1-201ENST00000429435 297 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RNU6-1211P-201ENST00000459179 105 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC091874.1-201ENST00000511402 339 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RNU1-95P-201ENST00000516357 160 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RNU1-128P-201ENST00000516704 160 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC026403.1-201ENST00000518938 295 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 MIR3145-201ENST00000580727 82 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AC090616.3-201ENST00000582184 217 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 AL357075.2-201ENST00000614906 189 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 SCARNA4-202ENST00000625402 129 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 MIR4679-1-201ENST00000637619 75 ntBASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHKBP1Q8TBC3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SHKBP1Q8TBC3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHKBP1Q8TBC3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHKBP1Q8TBC3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
SHKBP1Q8TBC3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHKBP1Q8TBC3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RNU5B-2P-201ENST00000363036 113 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RNU4-11P-201ENST00000365287 132 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 MIR539-201ENST00000365690 78 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 SNORA5A-201ENST00000384111 134 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 SNORA20-201ENST00000384662 132 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 MIR708-201ENST00000390708 88 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 SNORA3C-201ENST00000408792 125 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 PTGES3P4-201ENST00000426243 356 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 CKS1BP5-201ENST00000434172 273 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 ANP32BP2-201ENST00000454525 545 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RN7SL271P-201ENST00000487601 295 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RPL31P61-201ENST00000496160 376 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 SNORA72.7-201ENST00000516349 94 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP290-201ENST00000517133 127 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-58P-201ENST00000517143 103 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 ZNF192P1-203ENST00000565888 810 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 AC024614.2-201ENST00000577584 372 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 AC069200.1-201ENST00000609511 323 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 AC027309.3-201ENST00000623419 351 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 AC048347.1-201ENST00000624621 427 ntBASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHKBP1Q8TBC3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SNORA63.1-201ENST00000362493 131 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP119-201ENST00000362715 117 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SNORA63.4-201ENST00000362763 126 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP322-201ENST00000363617 119 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 MIR487A-201ENST00000385009 80 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SNORA68.2-201ENST00000391263 128 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 EBAG9P1-201ENST00000418955 543 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 VWA8P1-201ENST00000510889 176 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP170-201ENST00000517150 101 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 AC110491.1-201ENST00000562191 2010 ntBASIC4.07□□□□□ -1.76
SHKBP1Q8TBC3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-527P-201ENST00000363425 104 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RNU6-1255P-201ENST00000363434 112 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RNA5SP387-201ENST00000364226 106 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RPL21P17-201ENST00000397467 475 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 MIR513C-201ENST00000401352 84 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 RPL23AP48-201ENST00000406913 488 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 MIR1251-201ENST00000408552 70 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 CRYBB2P1-203ENST00000415709 538 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AC083863.1-201ENST00000438811 231 ntBASIC4.06□□□□□ -1.76
SHKBP1Q8TBC3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms