Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 Y_RNA.184-201ENST00000363884 108 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SNORA68.1-201ENST00000364537 132 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU5E-7P-201ENST00000365290 117 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-827P-201ENST00000365553 106 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-767P-201ENST00000384132 107 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SNORD116-20-201ENST00000384529 92 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SNORA26.7-201ENST00000391288 122 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL133475.1-201ENST00000404414 305 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RAP1BP3-201ENST00000407180 549 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 VN1R36P-201ENST00000414936 291 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL096701.2-201ENST00000416920 238 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL117339.3-201ENST00000418733 162 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 BX276092.3-201ENST00000424182 230 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 MTCO3P46-201ENST00000425787 232 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC104332.2-201ENST00000429959 156 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 IFNA20P-201ENST00000436840 528 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC004383.1-201ENST00000438135 289 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RPL39P40-201ENST00000445481 146 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 MRPL50P4-201ENST00000446432 475 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RPS26P21-201ENST00000475397 348 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 TRBVA-201ENST00000498804 316 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 RNU6-237P-201ENST00000515985 71 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SCARNA17.1-201ENST00000516211 143 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SNORA31.6-201ENST00000516241 130 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SCARNA17.2-201ENST00000516334 143 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC087241.2-201ENST00000535801 324 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC103996.1-201ENST00000555468 102 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 MIR5092-201ENST00000583139 88 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC078899.3-201ENST00000599065 212 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL158827.2-201ENST00000602494 330 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AC046143.2-201ENST00000609789 160 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL359198.2-201ENST00000611836 194 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 SCARNA17.4-201ENST00000614296 143 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AL691447.3-201ENST00000635020 330 ntBASIC1.91□□□□□ -2.1
LINC01006Q8NI28 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.91□□□□□ -2.1
LINC01006Q8NI28 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.9□□□□□ -2.1
LINC01006Q8NI28 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.135-201ENST00000363439 95 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.212-201ENST00000364177 102 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AL513475.1-201ENST00000406602 315 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 RNU6-1140P-201ENST00000410517 106 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC098614.3-201ENST00000438957 440 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 USP9YP8-201ENST00000441913 500 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AL359672.1-201ENST00000442302 409 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 OSTCP8-201ENST00000445117 448 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC107626.1-201ENST00000471084 183 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 MED28P2-201ENST00000475771 317 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC091951.2-201ENST00000500762 203 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC092436.3-201ENST00000511788 257 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 RNA5SP281-201ENST00000516504 135 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 SNORD19.2-201ENST00000516978 73 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 RN7SKP256-201ENST00000517201 314 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 SCARNA11.3-201ENST00000517276 130 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC087854.1-201ENST00000519706 414 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 COPS8P3-201ENST00000526024 482 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AP000889.2-201ENST00000532684 490 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AL391813.1-201ENST00000603098 260 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC103810.6-201ENST00000606708 136 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AL355073.2-201ENST00000612106 557 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AL138726.1-201ENST00000614873 333 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC022306.2-201ENST00000617563 647 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 AC092794.2-201ENST00000620933 563 ntBASIC1.9□□□□□ -2.11
LINC01006Q8NI28 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01006Q8NI28 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01006Q8NI28 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
LINC01006Q8NI28 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01006Q8NI28 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
LINC01006Q8NI28 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01006Q8NI28 RNU6-845P-201ENST00000362578 103 ntBASIC1.89□□□□□ -2.11
LINC01006Q8NI28 RNU1-91P-201ENST00000364746 163 ntBASIC1.89□□□□□ -2.11
LINC01006Q8NI28 RNU6-336P-201ENST00000364891 107 ntBASIC1.89□□□□□ -2.11
LINC01006Q8NI28 Y_RNA.301-201ENST00000364990 103 ntBASIC1.89□□□□□ -2.11
LINC01006Q8NI28 SNORD81.2-201ENST00000365153 76 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms