Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL121917.1-203ENST00000605534 577 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC096772.1-201ENST00000609146 564 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 RMST_4.1-201ENST00000616886 107 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AL159153.1-201ENST00000619688 317 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AL691447.3-201ENST00000635020 330 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 U2.21-201ENST00000637295 81 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 AC110491.1-201ENST00000562191 2010 ntBASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SIMC1Q8NDZ2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.19-201ENST00000362462 99 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-778P-201ENST00000363269 103 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 U8.8-201ENST00000365399 135 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.477-201ENST00000384352 108 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-933P-201ENST00000384424 107 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 SNORA51.11-201ENST00000384442 131 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 Y_RNA.526-201ENST00000384572 110 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC098614.2-201ENST00000426040 255 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 CYCSP32-201ENST00000440548 321 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-397P-201ENST00000516226 104 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 MIR892C-201ENST00000516410 77 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 RNU6-897P-201ENST00000517135 105 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC144568.1-201ENST00000520139 137 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC004584.2-201ENST00000570407 410 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 MIR3922-201ENST00000585192 84 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 RPL23AP78-201ENST00000599928 470 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 MIR3199-2-201ENST00000636243 86 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 U6.105-201ENST00000637379 88 ntBASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SIMC1Q8NDZ2 AP003122.5-201ENST00000527668 3766 ntBASIC3.34□□□□□ -1.88
SIMC1Q8NDZ2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SIMC1Q8NDZ2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SIMC1Q8NDZ2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.34□□□□□ -1.88
SIMC1Q8NDZ2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU4-50P-201ENST00000364361 141 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-1317P-201ENST00000364582 104 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 SNORA20.1-201ENST00000364790 130 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AL591034.2-201ENST00000402839 359 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU4-61P-201ENST00000411243 107 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RPL23AP22-201ENST00000437556 453 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC098831.1-201ENST00000440661 216 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RPL39P38-201ENST00000467018 153 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC093663.1-201ENST00000497190 394 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 SNORA40.15-201ENST00000516884 107 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-703P-201ENST00000516946 107 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AP006245.1-201ENST00000522549 120 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC025281.1-201ENST00000567026 265 ntBASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SIMC1Q8NDZ2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RPL9P7-201ENST00000330965 580 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.518-201ENST00000384552 113 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RNU6-1093P-201ENST00000391194 107 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AL096701.2-201ENST00000416920 238 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AP000907.1-201ENST00000428428 510 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AL513043.1-201ENST00000439124 535 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 CYCSP35-201ENST00000451978 304 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 MTND4LP30-201ENST00000454092 297 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RPL9P9-202ENST00000466501 579 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AC133134.1-201ENST00000466800 359 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RN7SL293P-201ENST00000481765 281 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 Y_RNA.673-201ENST00000516306 88 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AC109329.1-201ENST00000518744 317 ntBASIC3.32□□□□□ -1.88
SIMC1Q8NDZ2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms